List of works by Cheng Tan

A singularity-free torsion angle potential for coarse-grained molecular dynamics simulations

scientific article published on 01 July 2020

Atomistic picture for the folding pathway of a hybrid-1 type human telomeric DNA G-quadruplex

scientific article

DNA sliding in nucleosomes via twist defect propagation revealed by molecular simulations.

scientific article published in April 2018

Dynamic Coupling among Protein Binding, Sliding, and DNA Bending Revealed by Molecular Dynamics.

scientific article published on 16 June 2016

Dynamic and Structural Modeling of the Specificity in Protein-DNA Interactions Guided by Binding Assay and Structure Data

scientific article published on 12 June 2018

Implementation of residue-level coarse-grained models in GENESIS for large-scale molecular dynamics simulations

scientific article published on 05 April 2022

Localized frustration and binding-induced conformational change in recognition of 5S RNA by TFIIIA zinc finger.

scientific article published on 3 December 2013

Low folding cooperativity of HP35 revealed by single-molecule force spectroscopy and molecular dynamics simulation

scientific article published in April 2012

Modeling Structural Dynamics of Biomolecular Complexes by Coarse-Grained Molecular Simulations.

scientific article

Nucleosome allostery in pioneer transcription factor binding

scientific article published on 10 August 2020

Nucleosomes as allosteric scaffolds for genetic regulation

scientific article published on 02 January 2020

Role of water-bridged interactions in metal ion coupled protein allostery

scientific article published on 02 June 2022

Sequence-dependent nucleosome sliding in rotation-coupled and uncoupled modes revealed by molecular simulations

scientific article published in December 2017

The kinetic landscape of nucleosome assembly: A coarse-grained molecular dynamics study

scientific article published on 27 July 2021

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