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List of works by Joao B Xavier

A compilation of fecal microbiome shotgun metagenomics from hematopoietic cell transplantation patients

publication published on 18 May 2022

Altruistic cell death and collective drug resistance

scientific article published on January 1, 2012

Automated biofilm morphology quantification from confocal laser scanning microscopy imaging

scientific article published on January 1, 2003

Bow-tie signaling in c-di-GMP: Machine learning in a simple biochemical network

scientific article

Compilation of longitudinal microbiota data and hospitalome from hematopoietic cell transplantation patients

publication published on 02 March 2021

Compositional Lotka-Volterra describes microbial dynamics in the simplex

scientific article published on 29 May 2020

Enhanced inference of ecological networks by parameterizing ensembles of population dynamics models constrained with prior knowledge

scientific article published on 08 January 2020

Haematopoietic cell transplantation outcomes are linked to intestinal mycobiota dynamics and an expansion of Candida parapsilosis complex species

scientific article published on 11 November 2021

Lactose drives Enterococcus expansion to promote graft-versus-host disease

scientific article published on 01 November 2019

Mathematical models to study the biology of pathogens and the infectious diseases they cause

publication published on 15 March 2022

Microbiota as Predictor of Mortality in Allogeneic Hematopoietic-Cell Transplantation

scientific article published on 01 February 2020

Microenvironment-derived factors driving metastatic plasticity in melanoma.

scientific article

Modeling microbial cross-feeding at intermediate scale portrays community dynamics and species coexistence

scientific article published on 18 August 2020

Multilevel selection analysis of a microbial social trait

scientific article published on August 20, 2013

Profound Alterations of Intestinal Microbiota following a Single Dose of Clindamycin Results in Sustained Susceptibility to Clostridium difficile-Induced Colitis

scientific article published on October 17, 2011

Social evolution in multispecies biofilms

scientific article (publication date: 28 June 2011)

Social interaction in synthetic and natural microbial communities

scientific article published on April 12, 2011

Spatial-temporal dynamics of a microbial cooperative behavior resistant to cheating

scientific article published on 07 February 2022

Systems-level analysis of NalD mutation, a recurrent driver of rapid drug resistance in acute Pseudomonas aeruginosa infection

scientific article published on 20 December 2019

The Cancer Microbiome: Distinguishing Direct and Indirect Effects Requires a Systemic View

scientific article published on 07 February 2020

The gut microbiota is associated with immune cell dynamics in humans

scientific article published on 25 November 2020