List of works by Pontiano Kaleebu

'Test and Treat' Among Women at High Risk for HIV-infection in Kampala, Uganda: Antiretroviral Therapy Initiation and Associated Factors

scientific article

A KIR B centromeric region present in Africans but not Europeans protects pregnant women from pre-eclampsia

scientific article

A phase 2 study to evaluate the safety and immunogenicity of a recombinant HIV type 1 vaccine based on adeno-associated virus

scientific article published in August 2010

A polymorphism that reduces RANTES expression is associated with protection from death in HIV-seropositive Ugandans with advanced disease

scientific article published on 28 July 2006

A prospective study of trends in consumption of cigarettes and alcohol among adults in a rural Ugandan population cohort, 1994-2011.

scientific article

Adult life expectancy trends in the era of antiretroviral treatment in rural Uganda (1991-2012).

scientific article published on January 2016

Affordable in-house antiretroviral drug resistance assay with good performance in non-subtype B HIV-1.

scientific article

Afri-Can Forum 2 : Johannesburg, South Africa. 16-18 February 2015

African AIDS vaccine programme for a coordinated and collaborative vaccine development effort on the continent

scientific article published in December 2008

An appraisal of indicators used to monitor the treated population in antiretroviral programmes in low-income countries ⬇️

scientific article published on November 13, 2010

Analysis of the history and spread of HIV-1 in Uganda using phylodynamics

scientific article

Association between serotonin transporter gene polymorphisms and increased suicidal risk among HIV positive patients in Uganda

scientific article

Atorvastatin reduces T-cell activation and exhaustion among HIV-infected cART-treated suboptimal immune responders in Uganda: a randomised crossover placebo-controlled trial

scientific article published on 6 January 2015

Background morbidity in HIV vaccine trial participants from various geographic regions as assessed by unsolicited adverse events

scientific article

Baseline morbidity in 2,990 adult African volunteers recruited to characterize laboratory reference intervals for future HIV vaccine clinical trials

scientific article published on 30 April 2008

Brief Report: Enhanced Normalization of CD4/CD8 Ratio With Earlier Antiretroviral Therapy at Primary HIV Infection

scientific article published on 6 April 2016

CD45 variant alleles: possibly increased frequency of a novel exon 4 CD45 polymorphism in HIV seropositive Ugandans

scientific article published in May 2004

CD8 T-Cell Responses before and after Structured Treatment Interruption in Ugandan Adults Who Initiated ART with CD4 T Cells <200 Cell/μL: The DART Trial STI Substudy

scientific article

CLSI-derived hematology and biochemistry reference intervals for healthy adults in eastern and southern Africa

scientific article

COHORT PROFILE: The Complications of Long-Term Antiretroviral Therapy study in Uganda (CoLTART), a prospective clinical cohort

scientific article

Capacity for science in sub-Saharan Africa

scientific article

Cardiometabolic risk among HIV-POSITIVE Ugandan adults: prevalence, predictors and effect of long-term antiretroviral therapy

scientific article

Characterization of the Neutralizing Antibody Response in a Case of Genetically Linked HIV Superinfection

article

Common variants associated with plasma triglycerides and risk for coronary artery disease

scientific article

Community-based ART distribution system can effectively facilitate long-term program retention and low-rates of death and virologic failure in rural Uganda

scientific article

Comparison of sexual behavior and HIV risk between two HIV-1 serodiscordant couple cohorts: the CHAVI 002 study

scientific article

Complimentary Methods for Multivariate Genome-Wide Association Study Identify New Susceptibility Genes for Blood Cell Traits

article

Concordant proficiency in measurement of T-cell immunity in human immunodeficiency virus vaccine clinical trials by peripheral blood mononuclear cell and enzyme-linked immunospot assays in laboratories from three continents

scientific article published on 17 December 2008

Coreceptor and cytokine concentrations may not explain differences in disease progression observed in HIV-1 clade A and D infected Ugandans

scientific article

Correction: Evidence for Reduced Drug Susceptibility without Emergence of Major Protease Mutations following Protease Inhibitor Monotherapy Failure in the SARA Trial

scientific article

Correction: Geographic and Temporal Trends in the Molecular Epidemiology and Genetic Mechanisms of Transmitted HIV-1 Drug Resistance: An Individual-Patient- and Sequence-Level Meta-Analysis

scientific article

Creating an African HIV clinical research and prevention trials network: HIV prevalence, incidence and transmission

scientific article

Discovery and refinement of loci associated with lipid levels

scientific article

Distinct patterns of peripheral HIV-1-specific interferon- gamma responses in exposed HIV-1-seronegative individuals

scientific article

Duration of HIV-1 viral suppression on cessation of antiretroviral therapy in primary infection correlates with time on therapy

scientific article published on 25 October 2013

EDCTP regional networks of excellence: initial merits for planned clinical trials in Africa

scientific article

Effect of Couples Counselling on Reported HIV Risk Behaviour among HIV Serodiscordant Couples by ART Use, HIV Status and Gender in Rural Uganda

scientific article published on 18 September 2015

Effect of HIV-1 subtypes on disease progression in rural Uganda: a prospective clinical cohort study

scientific article

Effect of Schistosoma mansoni Infection on Innate and HIV-1-Specific T-Cell Immune Responses in HIV-1-Infected Ugandan Fisher Folk

scientific article published on 10 February 2016

Effect of high-intensity versus low-intensity praziquantel treatment on HIV disease progression in HIV and Schistosoma mansoni co-infected patients: a randomised controlled trial

article

Effect of human immunodeficiency virus (HIV) type 1 envelope subtypes A and D on disease progression in a large cohort of HIV-1-positive persons in Uganda

scientific article (publication date: May 2002)

Enhanced normalisation of CD4/CD8 ratio with early antiretroviral therapy in primary HIV infection

scientific article

Equivalence of ELISpot assays demonstrated between major HIV network laboratories

scientific article

Estimating incidence of HIV infection in Uganda

scientific article published in January 2009

Ethical and scientific considerations on the establishment of a controlled human infection model for schistosomiasis in Uganda: report of a stakeholders’ meeting held in Entebbe, Uganda

scholarly article published 6 August 2018

Evaluating the systems used to monitor HIV populations accessing therapy and care in low-income and lower-middle-income countries

scientific article published on December 2012

Evaluation of HIV-1 rapid tests and identification of alternative testing algorithms for use in Uganda.

scientific article published on 27 February 2018

Evidence for Reduced Drug Susceptibility without Emergence of Major Protease Mutations following Protease Inhibitor Monotherapy Failure in the SARA Trial

scientific article

Evolution of Drug Resistance During 48 Weeks of Zidovudine/Lamivudine/Tenofovir in the Absence of Real-Time Viral Load Monitoring ⬇️

scientific article published on October 1, 2010

Expression of the common heat-shock protein receptor CD91 is increased on monocytes of exposed yet HIV-1-seronegative subjects.

scientific article

Factors associated with dropout in a long term observational cohort of fishing communities around lake Victoria, Uganda

scientific article published on 24 December 2015

Feasibility and acceptability of mobile phone short message service as a support for patients receiving antiretroviral therapy in rural Uganda: a cross-sectional study

scientific article

First trial of the HIV-1 vaccine in Africa: Ugandan experience

scientific article

Frequencies of Gag-restricted T-cell escape "footprints" differ across HIV-1 clades A1 and D chronically infected Ugandans irrespective of host HLA B alleles

scientific article

From antiretroviral therapy access to provision of third line regimens: evidence of HIV Drug resistance mutations to first and second line regimens among Ugandan adults

scientific article

Gag-Protease Sequence Evolution Following Protease Inhibitor Monotherapy Treatment Failure in HIV-1 Viruses Circulating in East Africa

scientific article

Genotypic variation in the pol gene of HIV type 1 in an antiretroviral treatment-naive population in rural southwestern Uganda

scientific article published on October 2006

Geographic and temporal trends in the molecular epidemiology and genetic mechanisms of transmitted HIV-1 drug resistance: an individual-patient- and sequence-level meta-analysis

scientific article

HIV and syphilis prevalence and associated risk factors among fishing communities of Lake Victoria, Uganda

scientific article published on 10 August 2011

HIV drug resistance in African infants and young children newly diagnosed with HIV: a multicounty analysis

scientific article published on 8 August 2017

HIV in Africa (Communication arising): chemokine-receptor genes and AIDS risk.

scientific article published in May 2002

HIV monoclonal antibodies: a new opportunity to further reduce mother-to-child HIV transmission

scientific article (publication date: April 2014)

HIV treatment is associated with a two-fold higher probability of raised triglycerides: Pooled Analyses in 21 023 individuals in sub-Saharan Africa ⬇️

article

HIV type 1 antigen-responsive CD4+ T-lymphocytes in exposed yet HIV Type 1 seronegative Ugandans

scientific article published on January 2004

HIV type 1 subtype distribution, multiple infections, sexual networks, and partnership histories in female sex workers in Kampala, Uganda

scientific article published on 21 August 2011

HIV type 1-specific inter- and intrasubtype cellular immune responses in HIV type 1-infected Ugandans

scientific article published on July 2004

HIV-1 drug resistance before initiation or re-initiation of first-line antiretroviral therapy in low-income and middle-income countries: a systematic review and meta-regression analysis

scientific article published on 30 November 2017

HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences

scientific article published on 25 May 2017

HIV-1 subtype distribution trends and evidence of transmission clusters among incident cases in a rural clinical cohort in southwest Uganda, 2004-2010.

scientific article published on 16 December 2012

HIV-1 subtype dynamics over 10 years in a rural Ugandan cohort

scientific article published on February 2004

HIV-1 superinfection can occur in the presence of broadly neutralizing antibodies

scientific article published on 20 December 2017

HIV-1 transmission networks in high risk fishing communities on the shores of Lake Victoria in Uganda: A phylogenetic and epidemiological approach

scientific article published on 12 October 2017

Hepatitis B serological markers and plasma DNA concentrations

scientific article

High HIV incidence and socio-behavioral risk patterns in fishing communities on the shores of Lake Victoria, Uganda

scientific article published on June 2012

High HIV-1 prevalence, risk behaviours, and willingness to participate in HIV vaccine trials in fishing communities on Lake Victoria, Uganda

scientific article published on 22 July 2013

High incidence of HIV-1 infection in a general population of fishing communities around Lake Victoria, Uganda

scientific article (publication date: 2014)

High level of viral suppression and low switch rate to second-line antiretroviral therapy among HIV-infected adult patients followed over five years: retrospective analysis of the DART trial

scientific article

High rate of HIV resuppression after viral failure on first-line antiretroviral therapy in the absence of switch to second-line therapy

scientific article

Host HLA B*allele-associated multi-clade Gag T-cell recognition correlates with slow HIV-1 disease progression in antiretroviral therapy-naïve Ugandans

scientific article

Human immunodeficiency virus type 1 Western blot: revised diagnostic criteria with fewer indeterminate results for epidemiological studies in Africa

scientific article

Hypertension persisting after pre-eclampsia: a prospective cohort study at Mulago Hospital, Uganda

scientific article

Immune activation alters cellular and humoral responses to yellow fever 17D vaccine

scientific article

Immunogenicity of ALVAC-HIV vCP1521 in infants of HIV-1-infected women in Uganda (HPTN 027): the first pediatric HIV vaccine trial in Africa

scientific article

Immunology in Africa

scientific article published on 22 September 2015

Impact of the N348I mutation in HIV-1 reverse transcriptase on nonnucleoside reverse transcriptase inhibitor resistance in non-subtype B HIV-1.

scientific article published on 31 January 2011

Inter- and intra-genic intersubtype HIV-1 recombination in rural and semi-urban Uganda

scientific article

Interferon gamma (IFN-γ) negative CD4+ and CD8+ T-cells can produce immune mediators in response to viral antigens

scholarly article by Ritah Nakiboneka et al published 17 November 2018 in Vaccine

International health research monitoring: exploring a scientific and a cooperative approach using participatory action research

scientific article (publication date: 17 February 2014)

Intrapatient Evolutionary Dynamics of Human Immunodeficiency Virus Type 1 in Individuals Undergoing Alternative Treatment Strategies with Reverse Transcriptase Inhibitors

scientific article

Investigating the non-specific effects of BCG vaccination on the innate immune system in Ugandan neonates: study protocol for a randomised controlled trial

scientific article published on 11 April 2015

Killer cell immunoglobulin-like receptor (KIR) genes and their HLA-C ligands in a Ugandan population

scientific article published on 24 August 2013

Lack of Effectiveness of Antiretroviral Therapy in Preventing HIV Infection in Serodiscordant Couples in Uganda: An Observational Study

scientific article published on 14 July 2015

Linear mixed model for heritability estimation that explicitly addresses environmental variation

scientific article

Long-term follow-up of study participants from prophylactic HIV vaccine clinical trials in Africa

scientific article

Longitudinal evaluation of aflatoxin exposure in two cohorts in south-western Uganda

scientific article published on 24 July 2015

Lopinavir/ritonavir monotherapy after 24 weeks of second-line antiretroviral therapy in Africa: a randomized controlled trial (SARA).

scientific article published on 19 July 2012

Low drug resistance levels among drug-naive individuals with recent HIV type 1 infection in a rural clinical cohort in southwestern Uganda

scientific article published on 3 August 2012

Macrophage Inflammatory Protein-1 Beta and Interferon Gamma Responses in Ugandans with HIV-1 Acute/Early Infections

scientific article

Mean Corpuscular Volume as a Marker for Adherence to Zidovudine-Containing Therapy in HIV-Infected Adults

scientific article

Molecular identification, cloning and characterization of transmitted/founder HIV-1 subtype A, D and A/D infectious molecular clones

scientific article published on November 2012

Mortality and its predictors among antiretroviral therapy naïve HIV-infected individuals with CD4 cell count ≥350 cells/mm(3) compared to the general population: data from a population-based prospective HIV cohort in Uganda

scientific article

Multiple HIV-1 infections with evidence of recombination in heterosexual partnerships in a low risk Rural Clinical Cohort in Uganda

scientific article

Mutational Correlates of Virological Failure in Individuals Receiving a WHO-Recommended Tenofovir-Containing First-Line Regimen: An International Collaboration

scientific article published on 19 March 2017

New highly diverse hepatitis C strains detected in sub-Saharan Africa have unknown susceptibility to direct-acting antiviral treatments

article

Occult HIV-1 drug resistance to thymidine analogues following failure of first-line tenofovir combined with a cytosine analogue and nevirapine or efavirenz in sub Saharan Africa: a retrospective multi-centre cohort study

scientific article

Pilot study of antibodies against varicella zoster virus and human immunodeficiency virus in relation to the risk of developing stroke, nested within a rural cohort in Uganda

scientific article

Population attributable fraction of incident HIV infections associated with alcohol consumption in fishing communities around Lake Victoria, Uganda

scientific article published on 16 February 2017

Pregnancy, parturition and preeclampsia in women of African ancestry

scientific article

Prevalence and genetic diversity of HIV type 1 subtypes A and D in women attending antenatal clinics in Uganda

scientific article published on May 2007

Prevention of the sexual transmission of HIV-1: preparing for success

scientific article published on October 2008

Profile of T cell recognition of HIV type 1 consensus group M Gag and Nef peptides in a clade A1- and D-infected Ugandan population

scientific article published on 17 October 2011

Quantitative and qualitative differences in the T cell response to HIV in uninfected Ugandans exposed or unexposed to HIV-infected partners

scientific article published on 12 June 2013

Randomised controlled trials for Ebola: practical and ethical issues

scientific article published on 13 October 2014

Rapid accumulation of HIV-1 thymidine analogue mutations and phenotypic impact following prolonged viral failure on zidovudine-based first-line ART in sub-Saharan Africa

scientific article

Rates of HIV-1 superinfection and primary HIV-1 infection are similar in female sex workers in Uganda

scientific article published on September 2014

Recent HIV-1 infection in a high-risk Ugandan cohort: implications for Phase IIB test-of-concept HIV vaccine trials

scientific article published on April 2007

Recruitment and retention of women in fishing communities in HIV prevention research

scientific article

Relation between chemokine receptor use, disease stage, and HIV-1 subtypes A and D: results from a rural Ugandan cohort

scientific article published on May 2007

Research capacity. Enabling the genomic revolution in Africa

scientific article published in June 2014

Risky sexual behavior among patients on long-term antiretroviral therapy: a prospective cohort study in urban and rural Uganda

scholarly article by Stephen Okoboi published in October 2018

Safety and Immunogenicity of a 2-Dose Heterologous Vaccination Regimen With Ad26.ZEBOV and MVA-BN-Filo Ebola Vaccines: 12-Month Data From a Phase 1 Randomized Clinical Trial in Uganda and Tanzania.

scientific article

Safety and immunogenicity of recombinant low-dosage HIV-1 A vaccine candidates vectored by plasmid pTHr DNA or modified vaccinia virus Ankara (MVA) in humans in East Africa

scientific article published on 31 March 2008

Schistosoma mansoni and HIV acquisition in fishing communities of Lake Victoria, Uganda: a nested case-control study

scientific article published on 5 May 2015

Setting Up a Standardized Peripheral Blood Mononuclear Cells Processing Laboratory to Support Multi-center HIV/AIDS Vaccine and Intervention Trials

article

Short communication: HIV type 1 transmitted drug resistance and evidence of transmission clusters among recently infected antiretroviral-naive individuals from Ugandan fishing communities of Lake Victoria

scientific article published on May 2013

Short-course antiretroviral therapy in primary HIV infection

scientific article

Support for the RV144 HIV vaccine trial.

scientific article

Taking forward the World TB Day 2016 theme 'Unite to End Tuberculosis' for the WHO Africa Region

scientific article

Tat mutations in an African cohort that do not prevent transactivation but change its immunogenic properties

scientific article published on 22 October 2007

The African Genome Variation Project shapes medical genetics in Africa

scientific article

The arrival of untreatable multidrug-resistant HIV-1 in sub-Saharan Africa

scientific article

The effect of Tenofovir on renal function among Ugandan adults on long-term antiretroviral therapy: a cross-sectional enrolment analysis

scientific article published on 30 August 2016

The effect of anthelmintic treatment during pregnancy on HIV plasma viral load: results from a randomized, double-blind, placebo-controlled trial in Uganda ⬇️

scientific article

The effect of current Schistosoma mansoni infection on the immunogenicity of a candidate TB vaccine, MVA85A, in BCG-vaccinated adolescents: An open-label trial

scientific article published on 4 May 2017

The immune response to infection

The relationship between HIV type 1 disease progression and V3 serotype in a rural Ugandan cohort

scientific article

The virological durability of first-line ART among HIV-positive adult patients in resource limited settings without virological monitoring: a retrospective analysis of DART trial data

scientific article

Towards host-directed therapies for tuberculosis

scientific article

Transmitted HIV type 1 drug resistance among individuals with recent HIV infection in East and Southern Africa

scientific article

Transmitted antiretroviral drug resistance among drug-naive female sex workers with recent infection in Kampala, Uganda

scientific article published on May 2012

Transmitted antiretroviral drug resistance among newly HIV-1 diagnosed young individuals in Kampala

scientific article published on April 2011

Using verbal autopsy to assess the prevalence of HIV infection among deaths in the ART period in rural Uganda: a prospective cohort study, 2006-2008.

scientific article

Viral rebound and emergence of drug resistance in the absence of viral load testing: a randomized comparison between zidovudine-lamivudine plus Nevirapine and zidovudine-lamivudine plus Abacavir

scientific article published on January 2010

Virological Response and Antiretroviral Drug Resistance Emerging during Antiretroviral Therapy at Three Treatment Centers in Uganda

scientific article

Virological failure on first-line antiretroviral therapy; associated factors and a pragmatic approach for switching to second line therapy-evidence from a prospective cohort study in rural South-Western Uganda, 2004-2011

scholarly article by Patrick Kazooba et al published 2018 in The Pan African medical journal

Willingness to participate in HIV vaccine efficacy trials among high risk men and women from fishing communities along Lake Victoria in Uganda

scientific article published on 7 September 2013

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