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List of works by Chaolun Allen Chen

A New Shallow-Water Species, Polycyathus chaishanensis sp. nov. (Scleractinia: Caryophylliidae), from Chaishan, Kaohsiung, Taiwan ⬇️

scientific article published in March 2012

A Novel Dispersal Mechanism of a Coral-Threatening Sponge, Terpios hoshinota (Suberitidae, Porifera) ⬇️

scientific article published in September 2009

A functional approach to the structural complexity of coral assemblages based on colony morphological features

scientific article

A molecular census of early‐life stage scleractinian corals in shallow and mesophotic zones

scientific article published on 21 October 2021

Acropora distribution patterns in the northern and northeastern Persian Gulf

scientific article published in 2013

An Indo-Pacific coral spawning database

scientific article published on 29 January 2021

An Unexpectedly High Acropora Species Diversity at the Inlet of a Nuclear Power Plant within Kenting National Park, Southern Taiwan ⬇️

scientific article published in January 2010

Analyses of Corallimorpharian Transcriptomes Provide New Perspectives on the Evolution of Calcification in the Scleractinia (Corals)

scientific article

Analysis of Acropora muricata calmodulin (CaM) indicates that scleractinian corals possess the ancestral exon/intron organization of the eumetazoan CaM gene

scientific article

Analysis of the mitochondrial 12S rRNA gene supports a two-clade hypothesis of the evolutionary history of scleractinian corals

scientific article published in May 2002

Andreprevotia lacus sp. nov., isolated from a fish-culture pond

scientific article

Bacteria associated with an encrusting sponge (Terpios hoshinota) and the corals partially covered by the sponge ⬇️

scientific article published on January 25, 2011

BioTIME: A database of biodiversity time series for the Anthropocene

scientific article published in July 2018

Blind to morphology: genetics identifies several widespread ecologically common species and few endemics among Indo-Pacific cauliflower corals (Pocillopora, Scleractinia)

article

Can resistant coral-Symbiodinium associations enable coral communities to survive climate change? A study of a site exposed to long-term hot water input

scientific article published on 8 April 2014

Comparative Study of Genetic Variability of AAT and CT/GT Microsatellites in Staghorn Coral, Acropora (Scleractinia: Acroporidae) ⬇️

scientific article published in 2010

Comparative analyses of coding and noncoding DNA regions indicate that Acropora (Anthozoa: Scleractina) possesses a similar evolutionary tempo of nuclear vs. mitochondrial genomes as in plants

scientific article

Conservation of reef corals in the South China Sea based on species and evolutionary diversity

scientific article published on 29 January 2016

Conventional taxonomy obscures deep divergence between Pacific and Atlantic corals

scientific article published in February 2004

Coral Reef Resilience in Taiwan: Lessons from Long-Term Ecological Research on the Coral Reefs of Kenting National Park (Taiwan)

scientific article published on 31 October 2019

Corallomonas stylophorae gen. nov., sp. nov., a halophilic bacterium isolated from the reef-building coral Stylophora pistillata ⬇️

scientific article published on June 8, 2012

Correction: Keshavmurthy, S., et al. Coral Reef Resilience in Taiwan: Lessons from Long-Term Ecological Research on the Coral Reefs of Kenting National Park (Taiwan). Journal of Marine Science and Engineering 2019, 7, 338

scientific article published on 26 November 2020

Correction: Resurrecting a subgenus to genus: molecular phylogeny of and (order Scleractinia; family Euphylliidae; clade V)

scholarly article by Katrina S Luzon et al published 2018 in PeerJ

Corrigendum: Quantifying Coral Reef Resilience to Climate Change and Human Development: An Evaluation of Multiple Empirical Frameworks

scientific article published on 10 February 2021

Coverage, diversity, and functionality of a high-latitude coral community (Tatsukushi, Shikoku Island, Japan)

scientific article (publication date: 2013)

Critical research needs for identifying future changes in Gulf coral reef ecosystems

scientific article

DNA barcoding of shark meats identify species composition and CITES-listed species from the markets in Taiwan

scientific article

DNA barcoding reveals that the common cupped oyster in Taiwan is the Portuguese oyster Crassostrea angulata (Ostreoida; Ostreidae), not C. gigas

scientific article

DNA barcoding reveals the coral "laboratory-rat", Stylophora pistillata encompasses multiple identities

scientific article (publication date: 2013)

Demographic census confirms a stable population of the critically-endangered caryophyllid coral Polycyathus chaishanensis (Scleractinia; Caryophyllidae) in the Datan Algal Reef, Taiwan

scientific article published on 29 June 2020

Determination of the Thermal Tolerance of Symbiodinium Using the Activation Energy for Inhibiting Photosystem II Activity ⬇️

scientific article published in March 2012

Development of Novel Polymorphic Microsatellite Markers in Catch Bowl Coral, Isopora palifera (Scleractinia; Acroporidae) Using Next-generation Sequencing

scientific article published on 02 July 2018

Diverse Interactions between Corals and the Coral-Killing Sponge, Terpios Hoshinota (Suberitidae: Hadromerida) ⬇️

scientific article published in March 2012

Diverse responses of Symbiodinium types to menthol and DCMU treatment

scientific article published on 2 October 2017

Diversity and distribution of symbiodinium associated with seven common coral species in the Chagos Archipelago, central Indian Ocean

scientific article

Diversity of Zoantharia (Anthozoa: Hexacorallia) at Dongsha Atoll in the South China Sea

article

Doors are closing on early development in corals facing climate change.

scientific article

Dynamics of coral-associated bacterial communities acclimated to temperature stress based on recent thermal history

scientific article

Endozoicomonas montiporae sp. nov., isolated from the encrusting pore coral Montipora aequituberculata

scientific article

Establishment of a No-take Area (NTA) Could Not Guarantee the Preservation of Coral Communities in Chinwan Inner Bay, Penghu, Taiwan ⬇️

scientific article published in July 2011

Extension of the known distribution and depth range of the scleractinian coral Psammocora stellata: first record from a Taiwanese mesophotic reef

Extraordinary diversity of reef corals in the South China Sea

article

Filamentous calcareous alga provides substrate for coral-competitive macroalgae in the degraded lagoon of Dongsha Atoll, Taiwan.

scientific article published on 16 May 2019

Fine intervals are required when using point intercept transects to assess coral reef status

scientific article published in 2022

Flectobacillus roseus sp. nov., isolated from freshwater in Taiwan

scientific article

Genetic connectivity and historical demography of the blue barred parrotfish (Scarus ghobban) in the western Indian Ocean

scholarly article by Shakil Visram et al published 25 March 2010 in Marine Biology

High coral cover and subsequent high fish richness on mature breakwaters in Taiwan.

scientific article

Host-associated speciation in the coral barnacle Wanella milleporae (Cirripedia: Pyrgomatidae) inhabiting the Millepora coral

scientific article published in April 2009

Identification of scleractinian coral recruits using fluorescent censusing and DNA barcoding techniques

scientific article

Idiomarina aquimaris sp. nov., isolated from the reef-building coral Isopora palifera

scientific article

Influence of species specificity and other factors on bacteria associated with the coral Stylophora pistillata in Taiwan

scientific article

Influence of strong monsoon winds on the water quality around a marine cage-culture zone in a shallow and semi-enclosed bay in Taiwan ⬇️

scientific article published on 04 February 2012

Is a Living Fossil about to Go Locally Extinct? No Mitochondrial Genetic Variation in Horseshoe Crab Juveniles Tachypleus tridentatus at Haomeiliao Nature Reserve, Budai, Taiwan ⬇️

scientific article published in November 2009

Isolation and characteristics of 10 microsatellite markers from the endangered coconut crab (Birgus latro) ⬇️

scientific article published on September 15, 2008

Latitudinal Gradient of Morphological Variations in Zebra Coral Oulastrea crispata (Scleractinia: Faviidae) in the West Pacific ⬇️

scientific article published in 2011

Learning from the past is not enough to survive present and future bleaching threshold temperatures

scientific article published in 2022

Leptoria phrygia in Southern Taiwan shuffles and switches symbionts to resist thermal-induced bleaching

scientific article published on 08 May 2020

Long-Term Survey Is Necessary to Reveal Various Shifts of Microbial Composition in Corals.

scientific article

Loss and Gain of Group I Introns in the Mitochondrial Cox1 Gene of the Scleractinia (Cnidaria; Anthozoa)

scientific article published on 04 May 2017

Mitochondrial and nuclear genes suggest that stony corals are monophyletic but most families of stony corals are not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria)

scientific article published in 2008

Mitochondrial genome rearrangements in the scleractinia/corallimorpharia complex: implications for coral phylogeny

scientific article (publication date: May 2014)

Molecular assessment of (Scleractinia; Pocilloporidae) distribution along a depth gradient in Ludao, Taiwan

scientific article published in 2018

Molecular evidence shows low species diversity of coral-associated hydroids in Acropora corals

scientific article

Molecular phylogeny and biogeography of the grass lizards genus Takydromus (Reptilia: Lacertidae) of East Asia

scientific article published in February 2002

Monospecific Stands of Turbinaria mesenterina in the Pescadores (Penghu), Taiwan: Ecological and Conservational Significance ⬇️

scientific article published in September 2007

Novel group I introns encoding a putative homing endonuclease in the mitochondrial cox1 gene of Scleractinian corals

scientific article

Novel organization of the mitochondrial genome in the deep-sea coral, Madrepora oculata (Hexacorallia, Scleractinia, Oculinidae) and its taxonomic implications

scientific article

Novel pattern of AtXlox gene expression in starfish Archaster typicus embryos

scientific article published on February 2003

Nucleotide sequences of ribosomal internal transcribed spacers and their utility in distinguishing closely related Perinereis polychaets (Annelida; Polychaeta; Nereididae)

scientific article published on 01 January 2002

Oceanicaulis stylophorae sp. nov., isolated from the reef-building coral Stylophora pistillata ⬇️

scientific article published on November 11, 2011

Paracoccus isoporae sp. nov., isolated from the reef-building coral Isopora palifera

scientific article

Paracoccus stylophorae sp. nov., isolated from the reef-building coral Stylophora pistillata ⬇️

scientific article published on October 8, 2010

Phylogenetic utility of the ribosomal internal transcribed spacer 2 in Strumigenys spp. (Hymenoptera: Formicidae).

scientific article published in July 2004

Physiological and Biochemical Performances of Menthol-Induced Aposymbiotic Corals ⬇️

scientific article published on September 27, 2012

Physiological outperformance at the morphologically-transformed edge of the cyanobacteriosponge Terpios hoshinota (Suberitidae: Hadromerida) when confronting opponent corals

scientific article published on 25 June 2015

Population genetics and demography of the coral-killing cyanobacteriosponge, <i>Terpios hoshinota,</i> in the Indo-West Pacific

scientific article published on 31 May 2022

Population structure and genetic variability of six bar wrasse (Thallasoma hardwicki) in northern South China Sea revealed by mitochondrial control region sequences.

scientific article

Population subdivision of the tri-spine horseshoe crab, Tachypleus tridentatus, in Taiwan Strait

scientific article

Pseudosiderastrea Formosa sp. nov. (Cnidaria: Anthozoa: Scleractinia) a New Coral Species Endemic to Taiwan ⬇️

scientific article published in January 2012

Pseudoteredinibacter isoporae gen. nov., sp. nov., a marine bacterium isolated from the reef-building coral Isopora palifera ⬇️

scientific article published on September 10, 2010

Quantifying Coral Reef Resilience to Climate Change and Human Development: An Evaluation of Multiple Empirical Frameworks

scientific article published on 14 January 2021

Recurrent Disturbances and the Degradation of Hard Coral Communities in Taiwan ⬇️

scientific article published on August 30, 2012

Relict Siderastrea Savignyana (Scleractinia: Siderastreidae) in the Kiunga Marine National Reserve, Kenya ⬇️

scientific article published in July 2007

Repeated and Prolonged Temperature Anomalies Negate Symbiodiniaceae Genera Shuffling in the Coral Platygyra verweyi (Scleractinia; Merulinidae)

scientific article published on 20 November 2018

Reproductive Isolation among Acropora Species (Scleractinia: Acroporidae) in a Marginal Coral Assemblage ⬇️

scientific article published in January 2012

Resurrecting a subgenus to genus: molecular phylogeny of Euphyllia and Fimbriaphyllia (order Scleractinia; family Euphyllidae; clade V).

scientific article

Risk‐sensitive planning for conserving coral reefs under rapid climate change ⬇️

article by Hawthorne L. Beyer et al published 27 June 2018 in Conservation Letters

Roseivivax isoporae sp. nov., isolated from a reef-building coral, and emended description of the genus Roseivivax

scientific article

Scleractinian diversity in the upper mesophotic zone of Ludao (Taiwan): a museum collection with new records from Taiwanese waters

scientific article published on 23 September 2021

Scraping and grazing herbivorous/detritivorous fish display opposite feeding behaviours under different protection regulations

scientific article published on 01 April 2022

Seventy-four Universal Primers for Characterizing the Complete Mitochondrial Genomes of Scleractinian Corals (Cnidaria; Anthozoa) ⬇️

scientific article published in July 2011

Shimia isoporae sp. nov., isolated from the reef-building coral Isopora palifera

scientific article

Social-environmental drivers inform strategic management of coral reefs in the Anthropocene

scientific article published on 12 August 2019

Spatial Patterns and Environmental Settings of Non-reefal Coral Communities Across the Tropic of Cancer in the Penghu Archipelago (Pescadores), Taiwan

scientific article published on 26 October 2016

Spatial variation in the morphological traits of Pocillopora verrucosa along a depth gradient in Taiwan

scientific article published in PLoS ONE

Species delimitation in the reef coral genera Echinophyllia and Oxypora (Scleractinia, Lobophylliidae) with a description of two new species

scientific article

Specificity trumps flexibility-location-based stable associations between Symbiodiniaceae genera and Platygyra verweyi (Scleractinia; Merulinidae)

scientific article published on 05 May 2020

Strong horizontal and vertical connectivity in the coral Pocillopora verrucosa from Ludao, Taiwan, a small oceanic island

scientific article published on 11 October 2021

Structure of Benthic Communities along the Taiwan Latitudinal Gradient

scientific article

Symbiodinium spp. associated with scleractinian corals from Dongsha Atoll (Pratas), Taiwan, in the South China Sea

scientific article

Symbiont communities and host genetic structure of the brain coral Platygyra verweyi, at the outlet of a nuclear power plant and adjacent areas.

scientific article

Taxonomy and phylogenetic relationships of the coral genera Australomussa and Parascolymia (Scleractinia, Lobophylliidae)

scientific article published on 29 August 2014

Tenacibaculum aiptasiae sp. nov., isolated from a sea anemone Aiptasia pulchella

scientific article

Thalassotalea montiporae sp. nov., isolated from the encrusting pore coral Montipora aequituberculata

scientific article

The "Black Disease" of Reef-Building Corals at Green Island, Taiwan-Outbreak of a Cyanobacteriosponge, Terpios Hoshinota (Suberitidae; Hadromerida) ⬇️

scientific article published in July 2007

The "naked coral" hypothesis revisited--evidence for and against scleractinian monophyly

scientific article (publication date: 2014)

The 2014-17 Global Coral Bleaching Event: The Most Severe and Widespread Coral Reef Destruction

The Origin of the Subtropical Coral Alveopora japonica (Scleractinia: Acroporidae) in High-Latitude Environments

scientific article published on 04 February 2020

The Scleractinia (Cnidaria: Anthozoa) of Abu-Musa and Sirri Islands, Persian Gulf

scientific article published on 17 December 2018

The Smallest Oocytes among Broadcast-Spawning Actiniarians and a Unique Lunar Reproductive Cycle in a Unisexual Population of the Sea Anemone, Aiptasia pulchella (Anthozoa: Actiniaria) ⬇️

scientific article published in January 2008

The complete mitochondrial genomes of Pseudosiderastrea spp (Cnidaria, Scleractinia, Siderastreidae).

scientific article published on 28 January 2015

The complete mitochondrial genomes of needle corals, Seriatopora spp. (Scleractinia: Pocilloporidae): an idiosyncratic atp8, duplicated trnW gene, and hypervariable regions used to determine species phylogenies and recently diverged populations

scientific article published on 21 September 2007

The coral Platygyra verweyi exhibits local adaptation to long-term thermal stress through host-specific physiological and enzymatic response

scientific article published on 17 September 2019

The dynamics of microbial partnerships in the coral Isopora palifera

scientific article

Transcript response of soft coral (Scleronephthya gracillimum) on exposure to polycyclic aromatic hydrocarbons

scientific article published on 6 July 2013

Transcriptomic response in Acropora muricata under acute temperature stress follows preconditioned seasonal temperature fluctuations

scientific article published on 9 February 2018

Unique mitogenomic features in the scleractinian family pocilloporidae (scleractinia: astrocoeniina).

scientific article published on 14 May 2008

Vibrio stylophorae sp. nov., isolated from the reef-building coral Stylophora pistillata ⬇️

scientific article published on October 8, 2010

Vogesella lacus sp. nov., isolated from a soft-shell turtle culture pond

scientific article

When forms meet genes: revision of the scleractinian genera Micromussa and Homophyllia (Lobophylliidae) with a description of two new species and one new genus

scholarly article in Contributions to Zoology, vol. 85 no. 4, September 2016

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