List of works - Agnieszka Rybarczyk

2D-PAGE as an effective method of RNA degradome analysis.

scientific article published on 11 May 2011

A Role of Inflammation and Immunity in Essential Hypertension-Modeled and Analyzed Using Petri Nets

scientific article published on 09 May 2020

A Stochastic Petri Net-Based Model of the Involvement of Interleukin 18 in Atherosclerosis

scientific article published on 13 November 2020

AmiRNA Designer - new method of artificial miRNA design

scientific article published on 19 January 2016

Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia

scientific article published on 27 June 2022

Computational Pipeline for Reference-Free Comparative Analysis of RNA 3D Structures Applied to SARS-CoV-2 UTR Models

scientific article published on 25 August 2022

Computational prediction of non-enzymatic RNA degradation patterns.

scientific article

Holmes: a graphical tool for development, simulation and analysis of Petri net based models of complex biological systems.

scientific article

Modeling of the catalytic core of Arabidopsis thaliana Dicer-like 4 protein and its complex with double-stranded RNA.

scientific article published on 17 November 2016

Multi-agent approach to sequence structure simulation in the RNA World hypothesis

scientific article published on 28 August 2020

New in silico approach to assessing RNA secondary structures with non-canonical base pairs

scientific article published on 2 September 2015

Poseidon: An information retrieval and extraction system for metagenomic marine science

scientific article published in 2012

RNA partial degradation problem: motivation, complexity, algorithm

scientific article published on 12 May 2011

RNA-Seq-based analysis of differential gene expression associated with hepatitis C virus infection in a cell culture.

scientific article published on 25 October 2016

Sorting signal targeting mRNA into hepatic extracellular vesicles

scientific article

Tabu Search for the RNA Partial Degradation Problem

The role of Fenton reaction in ROS-induced toxicity underlying atherosclerosis - modeled and analyzed using a Petri net-based approach.

scientific article published on 6 January 2018

List of works by Agnieszka Rybarczyk

2D-PAGE as an effective method of RNA degradome analysis.

A Role of Inflammation and Immunity in Essential Hypertension-Modeled and Analyzed Using Petri Nets

A Stochastic Petri Net-Based Model of the Involvement of Interleukin 18 in Atherosclerosis

AmiRNA Designer - new method of artificial miRNA design

Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia

Computational Pipeline for Reference-Free Comparative Analysis of RNA 3D Structures Applied to SARS-CoV-2 UTR Models

Computational prediction of non-enzymatic RNA degradation patterns.

Holmes: a graphical tool for development, simulation and analysis of Petri net based models of complex biological systems.

Modeling of the catalytic core of Arabidopsis thaliana Dicer-like 4 protein and its complex with double-stranded RNA.

Multi-agent approach to sequence structure simulation in the RNA World hypothesis

New in silico approach to assessing RNA secondary structures with non-canonical base pairs

Poseidon: An information retrieval and extraction system for metagenomic marine science

RNA partial degradation problem: motivation, complexity, algorithm

RNA-Seq-based analysis of differential gene expression associated with hepatitis C virus infection in a cell culture.

Sorting signal targeting mRNA into hepatic extracellular vesicles

Tabu Search for the RNA Partial Degradation Problem

The role of Fenton reaction in ROS-induced toxicity underlying atherosclerosis - modeled and analyzed using a Petri net-based approach.