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List of works by Ram Podicheti

A two-step process for epigenetic inheritance in Arabidopsis

scientific article published on 20 March 2014

Administering GBrowse sites with WebGBrowse.

scientific article published in March 2011

An Ergatis-based prokaryotic genome annotation web server

scientific article published on 01 March 2010

Camelina seed transcriptome: a tool for meal and oil improvement and translational research

scientific article published on 03 April 2013

Correction: The Zinc-Finger Protein SOP1 Is Required for a Subset of the Nuclear Exosome Functions in Arabidopsis.

scientific article published on 23 March 2016

DNA sequence templates adjacent nucleosome and ORC sites at gene amplification origins in Drosophila

scientific article

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors

scientific article published on 10 May 2016

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors

scientific article published on 31 January 2017

De novo transcriptome sequencing in a songbird, the dark-eyed junco (Junco hyemalis): genomic tools for an ecological model system.

scientific article

Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean.

scientific article

Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean-specific genes.

scientific article

Evolutionary relationship of disease resistance genes in soybean and Arabidopsis specific for the Pseudomonas syringae effectors AvrB and AvrRpm1.

scientific article published on 17 July 2014

FEATnotator: A tool for integrated annotation of sequence features and variation, facilitating interpretation in genomics experiments.

scientific article published on 29 April 2015

Identification of Pol IV and RDR2-dependent precursors of 24 nt siRNAs guiding de novo DNA methylation in Arabidopsis

scientific article

Mapping RNA Sequences that Contact Viral Capsid Proteins in Virions.

scientific article published in July 2014

Mismatch Repair Proteins Initiate Epigenetic Alterations during Inflammation-Driven Tumorigenesis

scientific article published on 18 May 2017

Mutation of Arabidopsis SMC4 identifies condensin as a corepressor of pericentromeric transposons and conditionally expressed genes

scientific article

Oil biosynthesis in a basal angiosperm: transcriptome analysis of Persea Americana mesocarp

scientific article published on 16 August 2015

Plant Extracellular Vesicles Contain Diverse Small RNA Species and Are Enriched in 10- to 17-Nucleotide "Tiny" RNAs

article

RNA polymerases IV and V influence the 3' boundaries of Polymerase II transcription units in Arabidopsis.

scientific article published on 4 December 2017

Replication of nonautonomous retroelements in soybean appears to be both recent and common

scientific article

Stilbenoid prenyltransferases define key steps in the diversification of peanut phytoalexins

scientific article

The Zinc-Finger Protein SOP1 Is Required for a Subset of the Nuclear Exosome Functions in Arabidopsis

scientific article (publication date: February 2016)

The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color

scientific article

Using WebGBrowse to visualize genome annotation on GBrowse.

scientific article

WebGBrowse--a web server for GBrowse

scientific article published on 08 April 2009

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