List of works - Jessica L Metcalf

A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system ⬇️

scientific article

Air versus Water Chilling of Chicken: a Pilot Study of Quality, Shelf-Life, Microbial Ecology, and Economics

scientific article

American Gut: an Open Platform for Citizen Science Microbiome Research

article

Ancient DNA identifies post-glacial recolonisation, not recent bottlenecks, as the primary driver of contemporary mtDNA phylogeography and diversity in Scandinavian brown bears

article by Sarah C Bray et al published 9 June 2012 in Diversity and Distributions

Ancient human oral plaque preserves a wealth of biological data

scientific article

Animals in a bacterial world, a new imperative for the life sciences

scientific article (publication date: 26 February 2013)

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 September 2019

Balance Trees Reveal Microbial Niche Differentiation.

scientific article published on 17 January 2017

Carcass mass has little influence on the structure of gravesoil microbial communities

scientific article

Characterizing microbial communities through space and time

scientific article published on 7 December 2011

Comparative Analyses of Vertebrate Gut Microbiomes Reveal Convergence between Birds and Bats

scientific article published on 07 January 2020

Convergence of gut microbiomes in myrmecophagous mammals

scientific article

Convergence of human and Old World monkey gut microbiomes demonstrates the importance of human ecology over phylogeny

scientific article published on 08 October 2019

Coprolites reveal ecological interactions lost with the extinction of New Zealand birds.

scientific article published on 12 February 2018

Correction for Morton et al., "Uncovering the Horseshoe Effect in Microbial Analyses".

scientific article published in January 2018

Defining the human microbiome

scientific article

Effects of a Saccharomyces cerevisiae fermentation product on liver abscesses, fecal microbiome, and resistome in feedlot cattle raised without antibiotics

scientific article published on 22 February 2019

Evaluating the impact of domestication and captivity on the horse gut microbiome.

scientific article published on 14 November 2017

Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes

scientific article published on 11 July 2018

Experiences and lessons learned from two virtual, hands-on microbiome bioinformatics workshops

scientific article published on 24 June 2021

Ground beef microbiome changes with antimicrobial decontamination interventions and product storage

scientific article published on 05 June 2019

HIGH DIMENSIONAL COEXISTENCE BASED ON INDIVIDUAL VARIATION: A SYNTHESIS OF EVIDENCE

scientific article published in 2010

High-dimensional coexistence based on individual variation: a synthesis of evidence

article

Insights from characterizing extinct human gut microbiomes

scientific article

Integrating multiple lines of evidence into historical biogeography hypothesis testing: a Bison bison case study

scientific article (publication date: 22 February 2014)

Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes1

scientific article published on 01 November 2019

Is there convergence of gut microbes in blood-feeding vertebrates?

scientific article published on 03 June 2019

Late Pleistocene Australian Marsupial DNA Clarifies the Affinities of Extinct Megafaunal Kangaroos and Wallabies

scientific article (publication date: 18 December 2014)

Longitudinal analysis of microbial interaction between humans and the indoor environment

scientific article

Microbial community assembly and metabolic function during mammalian corpse decomposition.

scientific article published on 10 December 2015

Microbiology of death

scientific article

Microbiome Data Accurately Predicts the Postmortem Interval Using Random Forest Regression Models

scientific article published on 16 February 2018

Microbiome Tools for Forensic Science

scientific article

Microbiome analyses of blood and tissues suggest cancer diagnostic approach

scientific article published on 11 March 2020

Our microbial selves: what ecology can teach us

scientific article

Patterns of Oral Microbiota Diversity in Adults and Children: A Crowdsourced Population Study

scientific article published on 07 February 2020

Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies

scientific article published on 03 May 2016

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

Replenishing our defensive microbes

scientific article

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 August 2019

Revising the recent evolutionary history of equids using ancient DNA

scientific article

Seasonal variation of postmortem microbial communities

scientific article published on 4 March 2015

Subsistence strategies in traditional societies distinguish gut microbiomes

scientific article

Synergistic roles of climate warming and human occupation in Patagonian megafaunal extinctions during the Last Deglaciation

scientific article

The Effects of Captivity on the Mammalian Gut Microbiome

scientific article published in October 2017

The effect of climate and environmental change on the megafaunal moa of New Zealand in the absence of humans

article

The microbiome of uncontacted Amerindians

scientific article published in April 2015

Trace Evidence Potential in Postmortem Skin Microbiomes: From Death Scene to Morgue

scientific article published on 08 November 2018

Tracking down the sources of experimental contamination in microbiome studies

scientific article published on 17 December 2014

Uncovering the Horseshoe Effect in Microbial Analyses

scientific article published on January 2017

Using the gut microbiota as a novel tool for examining colobine primate GI health

article

Vertebrate decomposition is accelerated by soil microbes

scientific article

List of works by Jessica L Metcalf

A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system ⬇️

Air versus Water Chilling of Chicken: a Pilot Study of Quality, Shelf-Life, Microbial Ecology, and Economics

American Gut: an Open Platform for Citizen Science Microbiome Research

Ancient DNA identifies post-glacial recolonisation, not recent bottlenecks, as the primary driver of contemporary mtDNA phylogeography and diversity in Scandinavian brown bears

Ancient human oral plaque preserves a wealth of biological data

Animals in a bacterial world, a new imperative for the life sciences

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Balance Trees Reveal Microbial Niche Differentiation.

Carcass mass has little influence on the structure of gravesoil microbial communities

Characterizing microbial communities through space and time

Comparative Analyses of Vertebrate Gut Microbiomes Reveal Convergence between Birds and Bats

Convergence of gut microbiomes in myrmecophagous mammals

Convergence of human and Old World monkey gut microbiomes demonstrates the importance of human ecology over phylogeny

Coprolites reveal ecological interactions lost with the extinction of New Zealand birds.

Correction for Morton et al., "Uncovering the Horseshoe Effect in Microbial Analyses".

Defining the human microbiome

Effects of a Saccharomyces cerevisiae fermentation product on liver abscesses, fecal microbiome, and resistome in feedlot cattle raised without antibiotics

Evaluating the impact of domestication and captivity on the horse gut microbiome.

Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes

Experiences and lessons learned from two virtual, hands-on microbiome bioinformatics workshops

Ground beef microbiome changes with antimicrobial decontamination interventions and product storage

HIGH DIMENSIONAL COEXISTENCE BASED ON INDIVIDUAL VARIATION: A SYNTHESIS OF EVIDENCE

High-dimensional coexistence based on individual variation: a synthesis of evidence

Insights from characterizing extinct human gut microbiomes

Integrating multiple lines of evidence into historical biogeography hypothesis testing: a Bison bison case study

Investigation of tylosin in feed of feedlot cattle and effects on liver abscess prevalence, and fecal and soil microbiomes and resistomes1

Is there convergence of gut microbes in blood-feeding vertebrates?

Late Pleistocene Australian Marsupial DNA Clarifies the Affinities of Extinct Megafaunal Kangaroos and Wallabies

Longitudinal analysis of microbial interaction between humans and the indoor environment

Microbial community assembly and metabolic function during mammalian corpse decomposition.

Microbiology of death

Microbiome Data Accurately Predicts the Postmortem Interval Using Random Forest Regression Models

Microbiome Tools for Forensic Science

Microbiome analyses of blood and tissues suggest cancer diagnostic approach

Our microbial selves: what ecology can teach us

Patterns of Oral Microbiota Diversity in Adults and Children: A Crowdsourced Population Study

Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

Replenishing our defensive microbes

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Revising the recent evolutionary history of equids using ancient DNA

Seasonal variation of postmortem microbial communities

Subsistence strategies in traditional societies distinguish gut microbiomes

Synergistic roles of climate warming and human occupation in Patagonian megafaunal extinctions during the Last Deglaciation

The Effects of Captivity on the Mammalian Gut Microbiome

The effect of climate and environmental change on the megafaunal moa of New Zealand in the absence of humans

The microbiome of uncontacted Amerindians

Trace Evidence Potential in Postmortem Skin Microbiomes: From Death Scene to Morgue

Tracking down the sources of experimental contamination in microbiome studies

Uncovering the Horseshoe Effect in Microbial Analyses

Using the gut microbiota as a novel tool for examining colobine primate GI health

Vertebrate decomposition is accelerated by soil microbes