List of works - German Rivas

A 17-residue sequence from the matrix metalloproteinase-9 (MMP-9) hemopexin domain binds α4β1 integrin and inhibits MMP-9-induced functions in chronic lymphocytic leukemia B cells.

scientific article

A quantitative analysis of the effect of nucleotides and the M domain on the association equilibrium of ClpB

scientific article published on 22 February 2011

ASC Pyrin Domain Self-associates and Binds NLRP3 Protein Using Equivalent Binding Interfaces.

scientific article published on 18 July 2016

Active membrane viscoelasticity by the bacterial FtsZ-division protein.

scientific article published on 27 February 2012

An Equilibrium Model for the Mg2+-Linked Self-Assembly of FtsZ in the Presence of GTP or a GTP Analogue ⬇️

scientific article published on July 30, 2012

An olive pollen protein with allergenic activity, Ole e 10, defines a novel family of carbohydrate-binding modules and is potentially implicated in pollen germination.

scientific article published in August 2005

Analytical ultracentrifugation studies of phage phi29 protein p6 binding to DNA

scientific article published on 30 November 2008

Association equilibrium of the HIV-1 capsid protein in a crowded medium reveals that hexamerization during capsid assembly requires a functional C-domain dimerization interface

scientific article published on February 2013

Associative Interactions in Crowded Solutions of Biopolymers Counteract Depletion Effects.

scientific article

Bacterial FtsZ protein forms phase-separated condensates with its nucleoid-associated inhibitor SlmA

scientific article published on 06 December 2018

Bacterial division proteins FtsZ and ZipA induce vesicle shrinkage and cell membrane invagination.

scientific article published on 6 August 2013

Ca(2+)-linked association of human complement C1s and C1r

scientific article published on 01 March 1994

Calcium and temperature regulation of the stability of the human platelet integrin GPIIb/IIIa in solution: an analytical ultracentrifugation study

scientific article published on 01 January 1991

Calcium-linked self-association of human complement C1s

scientific article published on December 1, 1992

Characterization of heterologous protein-protein interactions using analytical ultracentrifugation

scientific article published on 01 October 1999

Charged Molecules Modulate the Volume Exclusion Effects Exerted by Crowders on FtsZ Polymerization

scientific article published on 12 February 2016

Combined analytical ultracentrifugation, light scattering and fluorescence spectroscopy studies on the functional associations of the bacterial division FtsZ protein ⬇️

scientific article published on 05 January 2013

Complement factor H binds to denatured rather than to native pentameric C-reactive protein

scientific article published on 11 September 2008

Control of the Structural Stability of the Tubulin Dimer by One High Affinity Bound Magnesium Ion at Nucleotide N-site

scientific article published in Journal of Biological Chemistry

Crowding Modulates the Conformation, Affinity, and Activity of the Components of the Bacterial Disaggregase Machinery.

scientific article published on 28 April 2016

Crowding activates ClpB and enhances its association with DnaK for efficient protein aggregate reactivation.

scientific article

Depolymerization dynamics of individual filaments of bacterial cytoskeletal protein FtsZ

scientific article

Development of a homogeneous fluorescence anisotropy assay to monitor and measure FtsZ assembly in solution.

scientific article

Diffusion and capture permits dynamic coupling between treadmilling FtsZ filaments and cell division proteins

scientific article published on 20 January 2020

Direct observation of the enhancement of noncooperative protein self-assembly by macromolecular crowding: indefinite linear self-association of bacterial cell division protein FtsZ.

scholarly article

Direct observation of the self-association of dilute proteins in the presence of inert macromolecules at high concentration via tracer sedimentation equilibrium: theory, experiment, and biological significance

scientific article published on 01 July 1999

Disease-associated mutations impacting BC-loop flexibility trigger long-range transthyretin tetramer destabilization and aggregation

scientific article published on 31 July 2021

Dissipative adaptation in driven self-assembly leading to self-dividing fibrils

scientific article published on 16 July 2018

Dynamic interaction of the Escherichia coli cell division ZipA and FtsZ proteins evidenced in nanodiscs.

scientific article

Effect of large refractive index gradients on the performance of absorption optics in the Beckman XL-A/I analytical ultracentrifuge: an experimental study

scientific article published on 01 February 2003

Effect of macromolecular crowding agents on human immunodeficiency virus type 1 capsid protein assembly in vitro.

scientific article published on November 2005

Effects of macromolecular crowding on the inhibition of virus assembly and virus-cell receptor recognition.

scientific article published on February 2011

Encapsulation of a compartmentalized cytoplasm mimic within a lipid membrane by microfluidics.

scientific article published on 31 March 2017

Escherichia coli ZipA Organizes FtsZ Polymers into Dynamic Ring-Like Protofilament Structures.

scientific article

Evidence That Bacteriophage λ Kil Peptide Inhibits Bacterial Cell Division by Disrupting FtsZ Protofilaments and Sequestering Protein Subunits

scientific article

Fluorescence anisotropy as a probe to study tracer proteins in crowded solutions.

scientific article published in September 2004

Fructose-1,6-bisphosphate acts both as an inducer and as a structural cofactor of the central glycolytic genes repressor (CggR).

scientific article published on 4 December 2007

FtsZ Polymers Tethered to the Membrane by ZipA Are Susceptible to Spatial Regulation by Min Waves.

scientific article published on May 2015

FtsZ bacterial cytoskeletal polymers on curved surfaces: the importance of lateral interactions

scientific article

FtsZ polymers bound to lipid bilayers through ZipA form dynamic two dimensional networks.

scientific article published on 16 December 2011

Giant vesicles: a powerful tool to reconstruct bacterial division assemblies in cell-like compartments.

scientific article published on 15 August 2013

Glycoprotein lib peptide 656-667 mimics the fibrinogen γ chain 402-411 binding site on platelet integrin GPIIb/IIIa

article

Heterodimers as the Structural Unit of the T=1 Capsid of the Fungal Double-Stranded RNA Rosellinia necatrix Quadrivirus 1.

scientific article published on 05 October 2016

High fluidity and soft elasticity of the inner membrane of Escherichia coli revealed by the surface rheology of model Langmuir monolayers.

scientific article

Hydrodynamic properties and quaternary structure of the 90 kDa heat-shock protein: effects of divalent cations.

scientific article published in October 2002

Independence between GTPase active sites in the Escherichia coli cell division protein FtsZ

scientific article published on 03 November 2011

Interaction of the Antitumor Drug 9-Aminoacridine with Guanidinobenzoatase Studied by Spectroscopic Methods: A Possible Tumor Marker Probe Based on the Fluorescence Exciplex Emission†

article

Intrinsic disorder of the bacterial cell division protein ZipA: coil-to-brush conformational transition.

scientific article

Isolation, Characterization and Lipid-Binding Properties of the Recalcitrant FtsA Division Protein from Escherichia coli ⬇️

scientific article published on June 27, 2012

Key role of two terminal domains in the bidirectional polymerization of FtsA protein.

scientific article published on 14 January 2012

Langevin computer simulations of bacterial protein filaments and the force-generating mechanism during cell division

scientific article published on 07 January 2008

Life in a crowded world

scientific article

Lipid domains and mechanical plasticity of Escherichia coli lipid monolayers

article

Loading a ring: structure of the Bacillus subtilis DnaB protein, a co-loader of the replicative helicase.

scientific article published on 9 January 2007

Macromolecular Crowding In Vitro, In Vivo, and In Between.

scientific article published on 23 September 2016

Macromolecular crowding and confinement: biochemical, biophysical, and potential physiological consequences

scientific article

Macromolecular interactions of the bacterial division FtsZ protein: from quantitative biochemistry and crowding to reconstructing minimal divisomes in the test tube

scientific article

Magnesium-induced linear self-association of the FtsZ bacterial cell division protein monomer. The primary steps for FtsZ assembly

scientific article published on 01 April 2000

Mg2+-Linked Self-Assembly of FtsZ in the Presence of GTP or a GTP Analogue Involves the Concerted Formation of a Narrow Size Distribution of Oligomeric Species ⬇️

scientific article published on May 22, 2012

Microenvironments created by liquid-liquid phase transition control the dynamic distribution of bacterial division FtsZ protein

scientific article

MinC protein shortens FtsZ protofilaments by preferentially interacting with GDP-bound subunits

scientific article published on 12 July 2013

Non-ideal tracer sedimentation equilibrium: a powerful tool for the characterization of macromolecular interactions in crowded solutions.

scientific article published in September 2004

Nucleotide and receptor density modulate binding of bacterial division FtsZ protein to ZipA containing lipid-coated microbeads.

scientific article

One-step purification, covalent immobilization, and additional stabilization of a thermophilic poly-His-tagged beta-galactosidase from Thermus sp. strain T2 by using novel heterofunctional chelate-epoxy Sepabeads.

scientific article published in January 2003

Phage phi29 protein p6 is in a monomer-dimer equilibrium that shifts to higher association states at the millimolar concentrations found in vivo

scientific article published on 01 September 1997

Plasmonic Nanosensors Reveal a Height Dependence of MinDE Protein Oscillations on Membrane Features

article

Plasmonic Nanosensors for Simultaneous Quantification of Multiple Protein–Protein Binding Affinities

article

Plasmonic Nanosensors for the Determination of Drug Effectiveness on Membrane Receptors

scientific article

Protein self-association in crowded protein solutions: a time-resolved fluorescence polarization study.

scientific article published on 30 September 2004

Quantitative characterization of weak self-association in concentrated solutions of immunoglobulin G via the measurement of sedimentation equilibrium and osmotic pressure

scientific article published on 23 June 2007

Recognizing and analyzing variability in amyloid formation kinetics: Simulation and statistical methods

scientific article published on 15 July 2016

Reconstitution and organization of Escherichia coli proto-ring elements (FtsZ and FtsA) inside giant unilamellar vesicles obtained from bacterial inner membranes.

scientific article published on 21 January 2011

Reconstitution of cytoskeletal protein assemblies for large-scale membrane transformation

scientific article

Relaxase DNA binding and cleavage are two distinguishable steps in conjugative DNA processing that involve different sequence elements of the nic site

scientific article published on 08 January 2010

RepA-WH1, the agent of an amyloid proteinopathy in bacteria, builds oligomeric pores through lipid vesicles.

scientific article

Reversible Membrane Tethering by ZipA Determines FtsZ Polymerization in Two and Three Dimensions

scientific article published on 09 September 2019

Role of the FtsA C terminus as a switch for polymerization and membrane association

scientific article published on 25 November 2014

Sedimentation Equilibrium Analysis of ClpB Self-Association in Diluted and Crowded Solutions.

scientific article published on 8 June 2015

Sedimentation equilibrium in a solution containing an arbitrary number of solute species at arbitrary concentrations: theory and application to concentrated solutions of ribonuclease.

scientific article published in March 2004

Sedimentation equilibrium-quantitative polyacrylamide gel electrophoresis (SE-QPAGE): a new technique for the detection of associations in multicomponent solutions.

scientific article published in December 1993

Small Molecule Inhibition of ERK Dimerization Prevents Tumorigenesis by RAS-ERK Pathway Oncogenes

scientific journal article

Sticholysin II, a cytolysin from the sea anemone Stichodactyla helianthus , is a monomer-tetramer associating protein

article

Strategy for fluorescent labeling of human acidic fibroblast growth factor without impairment of mitogenic activity: a bona fide tracer

scientific article published on 24 December 2010

Strong FtsZ is with the force: mechanisms to constrict bacteria.

scientific article

Structural Features of ϕ29 Single-stranded DNA-binding Protein

scientific article published on 3 January 1997

Structural Organization of the Major Autolysin from Streptococcus pneumoniae

scientific article published in Journal of Biological Chemistry

Structural analysis of tobacco etch potyvirus HC-pro oligomers involved in aphid transmission.

scientific article published on March 2005

Structural and functional analysis of phi29 p16.7C dimerization mutants: identification of a novel aromatic cage dimerization motif

scientific article published on 09 April 2007

Structural changes in RepA, a plasmid replication initiator, upon binding to origin DNA.

scientific article published on 7 March 2003

Structural characterization of the substrate transfer mechanism in Hsp70/Hsp90 folding machinery mediated by Hop.

scientific article

Structural characterization of toxic oligomers that are kinetically trapped during α-synuclein fibril formation.

scientific article published on 8 April 2015

Surface-Enhanced Raman scattering-based detection of the interactions between the essential cell division FtsZ protein and bacterial membrane elements.

scientific article published on 27 July 2012

Tau Structures

scientific article

The Bacterial DNA Binding Protein MatP Involved in Linking the Nucleoid Terminal Domain to the Divisome at Midcell Interacts with Lipid Membranes.

scientific article published on 28 May 2019

The Cell Division Protein FtsZ from Streptococcus pneumoniae Exhibits a GTPase Activity Delay.

scientific article published on September 2015

The GTPase activity of Escherichia coli FtsZ determines the magnitude of the FtsZ polymer bundling by ZapA in vitro.

scientific article published on November 2009

The Nucleoid Occlusion Protein SlmA Binds to Lipid Membranes

scientific article published on 01 September 2020

The Nucleoid Occlusion SlmA Protein Accelerates the Disassembly of the FtsZ Protein Polymers without Affecting Their GTPase Activity

scientific article

The spectrin repeat folds into a three-helix bundle in solution.

scientific article published in April 1996

The thermodynamics of association and unfolding of the 205-316 C-terminal fragment of thermolysin

scientific article published on 01 September 1995

Three-dimensional structure and stoichiometry of Helmintosporium victoriae190S totivirus.

scientific article published on 18 January 2006

Three-dimensional structure of penicillium chrysogenum virus: a double-stranded RNA virus with a genuine T=1 capsid.

scientific article published on August 2003

Toward an understanding of biochemical equilibria within living cells

scientific article published on 12 December 2017

Towards a bottom-up reconstitution of bacterial cell division.

scientific article published on 12 October 2012

Treadmilling analysis reveals new insights into dynamic FtsZ ring architecture.

scientific article published on 18 May 2018

Visualization of single Escherichia coli FtsZ filament dynamics with atomic force microscopy.

scientific article published on 26 March 2005

List of works by German Rivas

A 17-residue sequence from the matrix metalloproteinase-9 (MMP-9) hemopexin domain binds α4β1 integrin and inhibits MMP-9-induced functions in chronic lymphocytic leukemia B cells.

A quantitative analysis of the effect of nucleotides and the M domain on the association equilibrium of ClpB

ASC Pyrin Domain Self-associates and Binds NLRP3 Protein Using Equivalent Binding Interfaces.

Active membrane viscoelasticity by the bacterial FtsZ-division protein.

An Equilibrium Model for the Mg2+-Linked Self-Assembly of FtsZ in the Presence of GTP or a GTP Analogue ⬇️

An olive pollen protein with allergenic activity, Ole e 10, defines a novel family of carbohydrate-binding modules and is potentially implicated in pollen germination.

Analytical ultracentrifugation studies of phage phi29 protein p6 binding to DNA

Association equilibrium of the HIV-1 capsid protein in a crowded medium reveals that hexamerization during capsid assembly requires a functional C-domain dimerization interface

Associative Interactions in Crowded Solutions of Biopolymers Counteract Depletion Effects.

Bacterial FtsZ protein forms phase-separated condensates with its nucleoid-associated inhibitor SlmA

Bacterial division proteins FtsZ and ZipA induce vesicle shrinkage and cell membrane invagination.

Ca(2+)-linked association of human complement C1s and C1r

Calcium and temperature regulation of the stability of the human platelet integrin GPIIb/IIIa in solution: an analytical ultracentrifugation study

Calcium-linked self-association of human complement C1s

Characterization of heterologous protein-protein interactions using analytical ultracentrifugation

Charged Molecules Modulate the Volume Exclusion Effects Exerted by Crowders on FtsZ Polymerization

Combined analytical ultracentrifugation, light scattering and fluorescence spectroscopy studies on the functional associations of the bacterial division FtsZ protein ⬇️

Complement factor H binds to denatured rather than to native pentameric C-reactive protein

Control of the Structural Stability of the Tubulin Dimer by One High Affinity Bound Magnesium Ion at Nucleotide N-site

Crowding Modulates the Conformation, Affinity, and Activity of the Components of the Bacterial Disaggregase Machinery.

Crowding activates ClpB and enhances its association with DnaK for efficient protein aggregate reactivation.

Depolymerization dynamics of individual filaments of bacterial cytoskeletal protein FtsZ

Development of a homogeneous fluorescence anisotropy assay to monitor and measure FtsZ assembly in solution.

Diffusion and capture permits dynamic coupling between treadmilling FtsZ filaments and cell division proteins

Direct observation of the enhancement of noncooperative protein self-assembly by macromolecular crowding: indefinite linear self-association of bacterial cell division protein FtsZ.

Direct observation of the self-association of dilute proteins in the presence of inert macromolecules at high concentration via tracer sedimentation equilibrium: theory, experiment, and biological significance

Disease-associated mutations impacting BC-loop flexibility trigger long-range transthyretin tetramer destabilization and aggregation

Dissipative adaptation in driven self-assembly leading to self-dividing fibrils

Dynamic interaction of the Escherichia coli cell division ZipA and FtsZ proteins evidenced in nanodiscs.

Effect of large refractive index gradients on the performance of absorption optics in the Beckman XL-A/I analytical ultracentrifuge: an experimental study

Effect of macromolecular crowding agents on human immunodeficiency virus type 1 capsid protein assembly in vitro.

Effects of macromolecular crowding on the inhibition of virus assembly and virus-cell receptor recognition.

Encapsulation of a compartmentalized cytoplasm mimic within a lipid membrane by microfluidics.

Escherichia coli ZipA Organizes FtsZ Polymers into Dynamic Ring-Like Protofilament Structures.

Evidence That Bacteriophage λ Kil Peptide Inhibits Bacterial Cell Division by Disrupting FtsZ Protofilaments and Sequestering Protein Subunits

Fluorescence anisotropy as a probe to study tracer proteins in crowded solutions.

Fructose-1,6-bisphosphate acts both as an inducer and as a structural cofactor of the central glycolytic genes repressor (CggR).

FtsZ Polymers Tethered to the Membrane by ZipA Are Susceptible to Spatial Regulation by Min Waves.

FtsZ bacterial cytoskeletal polymers on curved surfaces: the importance of lateral interactions

FtsZ polymers bound to lipid bilayers through ZipA form dynamic two dimensional networks.

Giant vesicles: a powerful tool to reconstruct bacterial division assemblies in cell-like compartments.

Glycoprotein lib peptide 656-667 mimics the fibrinogen γ chain 402-411 binding site on platelet integrin GPIIb/IIIa

Heterodimers as the Structural Unit of the T=1 Capsid of the Fungal Double-Stranded RNA Rosellinia necatrix Quadrivirus 1.

High fluidity and soft elasticity of the inner membrane of Escherichia coli revealed by the surface rheology of model Langmuir monolayers.

Hydrodynamic properties and quaternary structure of the 90 kDa heat-shock protein: effects of divalent cations.

Independence between GTPase active sites in the Escherichia coli cell division protein FtsZ

Interaction of the Antitumor Drug 9-Aminoacridine with Guanidinobenzoatase Studied by Spectroscopic Methods: A Possible Tumor Marker Probe Based on the Fluorescence Exciplex Emission†

Intrinsic disorder of the bacterial cell division protein ZipA: coil-to-brush conformational transition.

Isolation, Characterization and Lipid-Binding Properties of the Recalcitrant FtsA Division Protein from Escherichia coli ⬇️

Key role of two terminal domains in the bidirectional polymerization of FtsA protein.

Langevin computer simulations of bacterial protein filaments and the force-generating mechanism during cell division

Life in a crowded world

Lipid domains and mechanical plasticity of Escherichia coli lipid monolayers

Loading a ring: structure of the Bacillus subtilis DnaB protein, a co-loader of the replicative helicase.

Macromolecular Crowding In Vitro, In Vivo, and In Between.

Macromolecular crowding and confinement: biochemical, biophysical, and potential physiological consequences

Macromolecular interactions of the bacterial division FtsZ protein: from quantitative biochemistry and crowding to reconstructing minimal divisomes in the test tube

Magnesium-induced linear self-association of the FtsZ bacterial cell division protein monomer. The primary steps for FtsZ assembly

Mg2+-Linked Self-Assembly of FtsZ in the Presence of GTP or a GTP Analogue Involves the Concerted Formation of a Narrow Size Distribution of Oligomeric Species ⬇️

Microenvironments created by liquid-liquid phase transition control the dynamic distribution of bacterial division FtsZ protein

MinC protein shortens FtsZ protofilaments by preferentially interacting with GDP-bound subunits

Non-ideal tracer sedimentation equilibrium: a powerful tool for the characterization of macromolecular interactions in crowded solutions.

Nucleotide and receptor density modulate binding of bacterial division FtsZ protein to ZipA containing lipid-coated microbeads.

One-step purification, covalent immobilization, and additional stabilization of a thermophilic poly-His-tagged beta-galactosidase from Thermus sp. strain T2 by using novel heterofunctional chelate-epoxy Sepabeads.

Phage phi29 protein p6 is in a monomer-dimer equilibrium that shifts to higher association states at the millimolar concentrations found in vivo

Plasmonic Nanosensors Reveal a Height Dependence of MinDE Protein Oscillations on Membrane Features

Plasmonic Nanosensors for Simultaneous Quantification of Multiple Protein–Protein Binding Affinities

Plasmonic Nanosensors for the Determination of Drug Effectiveness on Membrane Receptors

Protein self-association in crowded protein solutions: a time-resolved fluorescence polarization study.

Quantitative characterization of weak self-association in concentrated solutions of immunoglobulin G via the measurement of sedimentation equilibrium and osmotic pressure

Recognizing and analyzing variability in amyloid formation kinetics: Simulation and statistical methods

Reconstitution and organization of Escherichia coli proto-ring elements (FtsZ and FtsA) inside giant unilamellar vesicles obtained from bacterial inner membranes.

Reconstitution of cytoskeletal protein assemblies for large-scale membrane transformation

Relaxase DNA binding and cleavage are two distinguishable steps in conjugative DNA processing that involve different sequence elements of the nic site

RepA-WH1, the agent of an amyloid proteinopathy in bacteria, builds oligomeric pores through lipid vesicles.

Reversible Membrane Tethering by ZipA Determines FtsZ Polymerization in Two and Three Dimensions

Role of the FtsA C terminus as a switch for polymerization and membrane association

Sedimentation Equilibrium Analysis of ClpB Self-Association in Diluted and Crowded Solutions.

Sedimentation equilibrium in a solution containing an arbitrary number of solute species at arbitrary concentrations: theory and application to concentrated solutions of ribonuclease.