List of works - Philippe Broet

A Bagged, Partially Linear, Tree-Based Regression Procedure for Prediction and Variable Selection.

scientific article published on 28 July 2015

A Rescue Strategy for Handling Unevaluable Patients in Simon's Two Stage Design.

scientific article published on 14 September 2015

A discrimination index for selecting markers of tumor growth dynamic across multiple cancer studies with a cure fraction.

scientific article published on 6 March 2013

A mixture model approach to multiple testing for the genetic analysis of gene expression.

scientific article

A mixture model-based strategy for selecting sets of genes in multiclass response microarray experiments.

scientific article

A model-based statistic for detecting molecular markers associated with complex survival patterns in early-stage cancer.

scientific article published on 6 August 2012

A novel tree-based procedure for deciphering the genomic spectrum of clinical disease entities.

scientific article published on 16 April 2014

A pseudo-R2 measure for selecting genomic markers with crossing hazards functions.

scientific article

A score test for comparing cross-sectional survival data with a fraction of non-susceptible patients and its application in clinical immunology.

scientific article

A score test for establishing non-inferiority with respect to short-term survival in two-sample comparisons with identical proportions of long-term survivors

scientific article published on 01 March 2003

A semiparametric approach for the two-sample comparison of survival times with long-term survivors.

scientific article

A test for comparing current status survival data with crossing hazard functions and its application to immunogenicity of biotherapeutics.

scientific article published on 30 August 2017

A two-stage design for phase II trials with time-to-event endpoint using restricted follow-up.

scientific article

A uniform activated B-cell-like immunophenotype might explain the poor prognosis of primary central nervous system lymphomas: analysis of 83 cases

article

Analyzing prognostic factors in breast cancer using a multistate model

scientific article published on 01 March 1999

Bagging survival tree procedure for variable selection and prediction in the presence of nonsusceptible patients.

scientific article

Bayesian hierarchical model for identifying changes in gene expression from microarray experiments.

scientific article published on January 2002

CXCL12 expression by healthy and malignant ovarian epithelial cells.

scientific article

Clinical outcome of patients with anti-Hu-associated encephalomyelitis after treatment of the tumor

scientific article published on 01 November 1999

Clinicogenomic factors of biotherapy immunogenicity in autoimmune disease: A prospective multicohort study of the ABIRISK consortium

scientific article published on 30 October 2020

Constitutive phosphoinositide 3-kinase/Akt activation represents a favorable prognostic factor in de novo acute myelogenous leukemia patients.

scientific article published on 10 April 2007

Contralateral breast cancer: annual incidence and risk parameters.

scientific article

Correlations between molecular profile and radiologic pattern in oligodendroglial tumors.

scientific article

Detection of chromosomal abnormalities using high resolution arrays in clinical cancer research.

scientific article published on 15 June 2011

Detection of gammopathy by serum protein electrophoresis for predicting and managing therapy of lymphoproliferative disorder in 911 recipients of liver transplants

scientific article published on 01 September 2001

Detection of gene copy number changes in CGH microarrays using a spatially correlated mixture model.

scientific article published on 2 February 2006

Discussion

Distinct genetic loci control plasma HIV-RNA and cellular HIV-DNA levels in HIV-1 infection: the ANRS Genome Wide Association 01 study

scientific article

False discovery rate estimation for frequentist pharmacovigilance signal detection methods.

scientific article

FcgammaRIIB is differentially expressed during B cell maturation and in B-cell lymphomas.

scientific article published in January 2004

Finding exclusively deleted or amplified genomic areas in lung adenocarcinomas using a novel chromosomal pattern analysis

scientific article

Genetics of VEGF serum variation in human isolated populations of cilento: importance of VEGF polymorphisms.

scientific article

Genome-wide copy number alterations detection in fresh frozen and matched FFPE samples using SNP 6.0 arrays

scientific article published on 01 November 2008

Genomic Profiles Specific to Patient Ethnicity in Lung Adenocarcinoma ⬇️

scientific article published on April 26, 2011

IL28B polymorphism is associated with treatment response in patients with genotype 4 chronic hepatitis C.

scientific article published on 25 September 2011

Identifying common prognostic factors in genomic cancer studies: a novel index for censored outcomes.

scientific article

Identifying gene expression changes in breast cancer that distinguish early and late relapse among uncured patients

scientific article published on 21 March 2006

Impaired performance of FDR-based strategies in whole-genome association studies when SNPs are excluded prior to the analysis

scientific article published on 01 January 2009

Influence of trial duration on the bias of the estimated treatment effect in clinical trials when individual heterogeneity is ignored.

scientific article published on 16 January 2015

Inhibition of human bladder tumour cell growth by fibroblast growth factor receptor 2b is independent of its kinase activity. Involvement of the carboxy-terminal region of the receptor.

scientific article

Intertumor heterogeneity of non-small-cell lung carcinomas revealed by multiplexed mutation profiling and integrative genomics

scientific article published on 03 April 2014

Lack of relationship between EGFR-1 immunohistochemical expression and prognosis in a multicentre clinical trial of 93 patients with advanced primary ovarian epithelial cancer (GINECO group)

scientific article published on August 2004

Monocyte NOTCH2 expression predicts IFN-β immunogenicity in multiple sclerosis patients.

scientific article

Multiple testing in the genomics era: findings from Genetic Analysis Workshop 15, Group 15.

scientific article published on January 2007

Pooled analysis of prognostic impact of uPA and PAI-1 in breast cancer patients

scientific article published on 01 September 2003

Pooled analysis of prognostic impact of urokinase-type plasminogen activator and its inhibitor PAI-1 in 8377 breast cancer patients

scientific article published on 01 January 2002

Prognostic value of uPA and p53 accumulation measured by quantitative biochemical assays in 1245 primary breast cancer patients: a multicentre study.

scientific article published on May 1999

Reduction of microRNA 122 expression in IFNL3 CT/TT carriers and during progression of fibrosis in patients with chronic hepatitis C

scientific article

Short and long-term effects on survival in breast cancer patients treated by primary chemotherapy: an updated analysis of a randomized trial

scientific article published on 01 November 1999

Single-Nucleotide Polymorphism–Defined Class I and Class III Major Histocompatibility Complex Genetic Subregions Contribute to Natural Long-term Nonprogression in HIV Infection

article

Standardizing terms, definitions and concepts for describing and interpreting unwanted immunogenicity of biopharmaceuticals: recommendations of the Innovative Medicines Initiative ABIRISK consortium

scientific article

Thymidine kinase as a proliferative marker: clinical relevance in 1,692 primary breast cancer patients.

scientific article published in June 2001

Treatment of paraneoplastic neurological syndromes with antineuronal antibodies (Anti-Hu, anti-Yo) with a combination of immunoglobulins, cyclophosphamide, and methylprednisolone.

scientific article

Treatment of supratentorial glioblastoma multiforme with radiotherapy and a combination of BCNU and tamoxifen: a phase II study.

scientific article published in January 1999

Two-sample statistics for testing the equality of survival functions against improper semi-parametric accelerated failure time alternatives: an application to the analysis of a breast cancer clinical trial.

scientific article

Unobserved covariates in the two-sample comparison of survival times: a maximum efficiency robust test

scientific article published on 01 July 1999

Whole-Genome and Epigenomic Landscapes of Etiologically Distinct Subtypes of Cholangiocarcinoma.

scientific article published on 30 June 2017

[Contralateral breast cancer: metastasis or second primary cancer?]

scientific article published on 01 October 1996

[Long-term prognostic role of steroid receptors in cancer of the breast]

scientific article published on 01 April 1998

[Multiple comparison procedures: principles, limits. Applications to microarray phenotype-genotype analysis]

scientific article published on 01 December 2004

List of works by Philippe Broet

A Bagged, Partially Linear, Tree-Based Regression Procedure for Prediction and Variable Selection.

A Rescue Strategy for Handling Unevaluable Patients in Simon's Two Stage Design.

A discrimination index for selecting markers of tumor growth dynamic across multiple cancer studies with a cure fraction.

A mixture model approach to multiple testing for the genetic analysis of gene expression.

A mixture model-based strategy for selecting sets of genes in multiclass response microarray experiments.

A model-based statistic for detecting molecular markers associated with complex survival patterns in early-stage cancer.

A novel tree-based procedure for deciphering the genomic spectrum of clinical disease entities.

A pseudo-R2 measure for selecting genomic markers with crossing hazards functions.

A score test for comparing cross-sectional survival data with a fraction of non-susceptible patients and its application in clinical immunology.

A score test for establishing non-inferiority with respect to short-term survival in two-sample comparisons with identical proportions of long-term survivors

A semiparametric approach for the two-sample comparison of survival times with long-term survivors.

A test for comparing current status survival data with crossing hazard functions and its application to immunogenicity of biotherapeutics.

A two-stage design for phase II trials with time-to-event endpoint using restricted follow-up.

A uniform activated B-cell-like immunophenotype might explain the poor prognosis of primary central nervous system lymphomas: analysis of 83 cases

Analyzing prognostic factors in breast cancer using a multistate model

Bagging survival tree procedure for variable selection and prediction in the presence of nonsusceptible patients.

Bayesian hierarchical model for identifying changes in gene expression from microarray experiments.

CXCL12 expression by healthy and malignant ovarian epithelial cells.

Clinical outcome of patients with anti-Hu-associated encephalomyelitis after treatment of the tumor

Clinicogenomic factors of biotherapy immunogenicity in autoimmune disease: A prospective multicohort study of the ABIRISK consortium

Constitutive phosphoinositide 3-kinase/Akt activation represents a favorable prognostic factor in de novo acute myelogenous leukemia patients.

Contralateral breast cancer: annual incidence and risk parameters.

Correlations between molecular profile and radiologic pattern in oligodendroglial tumors.

Detection of chromosomal abnormalities using high resolution arrays in clinical cancer research.

Detection of gammopathy by serum protein electrophoresis for predicting and managing therapy of lymphoproliferative disorder in 911 recipients of liver transplants

Detection of gene copy number changes in CGH microarrays using a spatially correlated mixture model.

Discussion

Distinct genetic loci control plasma HIV-RNA and cellular HIV-DNA levels in HIV-1 infection: the ANRS Genome Wide Association 01 study

False discovery rate estimation for frequentist pharmacovigilance signal detection methods.

FcgammaRIIB is differentially expressed during B cell maturation and in B-cell lymphomas.

Finding exclusively deleted or amplified genomic areas in lung adenocarcinomas using a novel chromosomal pattern analysis

Genetics of VEGF serum variation in human isolated populations of cilento: importance of VEGF polymorphisms.

Genome-wide copy number alterations detection in fresh frozen and matched FFPE samples using SNP 6.0 arrays

Genomic Profiles Specific to Patient Ethnicity in Lung Adenocarcinoma ⬇️

IL28B polymorphism is associated with treatment response in patients with genotype 4 chronic hepatitis C.

Identifying common prognostic factors in genomic cancer studies: a novel index for censored outcomes.

Identifying gene expression changes in breast cancer that distinguish early and late relapse among uncured patients

Impaired performance of FDR-based strategies in whole-genome association studies when SNPs are excluded prior to the analysis

Influence of trial duration on the bias of the estimated treatment effect in clinical trials when individual heterogeneity is ignored.

Inhibition of human bladder tumour cell growth by fibroblast growth factor receptor 2b is independent of its kinase activity. Involvement of the carboxy-terminal region of the receptor.

Intertumor heterogeneity of non-small-cell lung carcinomas revealed by multiplexed mutation profiling and integrative genomics

Lack of relationship between EGFR-1 immunohistochemical expression and prognosis in a multicentre clinical trial of 93 patients with advanced primary ovarian epithelial cancer (GINECO group)

Monocyte NOTCH2 expression predicts IFN-β immunogenicity in multiple sclerosis patients.

Multiple testing in the genomics era: findings from Genetic Analysis Workshop 15, Group 15.

Pooled analysis of prognostic impact of uPA and PAI-1 in breast cancer patients

Pooled analysis of prognostic impact of urokinase-type plasminogen activator and its inhibitor PAI-1 in 8377 breast cancer patients

Prognostic value of uPA and p53 accumulation measured by quantitative biochemical assays in 1245 primary breast cancer patients: a multicentre study.

Reduction of microRNA 122 expression in IFNL3 CT/TT carriers and during progression of fibrosis in patients with chronic hepatitis C

Short and long-term effects on survival in breast cancer patients treated by primary chemotherapy: an updated analysis of a randomized trial

Single-Nucleotide Polymorphism–Defined Class I and Class III Major Histocompatibility Complex Genetic Subregions Contribute to Natural Long-term Nonprogression in HIV Infection

Standardizing terms, definitions and concepts for describing and interpreting unwanted immunogenicity of biopharmaceuticals: recommendations of the Innovative Medicines Initiative ABIRISK consortium

Thymidine kinase as a proliferative marker: clinical relevance in 1,692 primary breast cancer patients.

Treatment of paraneoplastic neurological syndromes with antineuronal antibodies (Anti-Hu, anti-Yo) with a combination of immunoglobulins, cyclophosphamide, and methylprednisolone.

Treatment of supratentorial glioblastoma multiforme with radiotherapy and a combination of BCNU and tamoxifen: a phase II study.

Two-sample statistics for testing the equality of survival functions against improper semi-parametric accelerated failure time alternatives: an application to the analysis of a breast cancer clinical trial.

Unobserved covariates in the two-sample comparison of survival times: a maximum efficiency robust test

Whole-Genome and Epigenomic Landscapes of Etiologically Distinct Subtypes of Cholangiocarcinoma.

[Contralateral breast cancer: metastasis or second primary cancer?]

[Long-term prognostic role of steroid receptors in cancer of the breast]

[Multiple comparison procedures: principles, limits. Applications to microarray phenotype-genotype analysis]