List of works by Yasunori Yamamoto

A SPARQL Endpoint Profiler for an Efficient Question Answering System ⬇️

Allie: a database and a search service of abbreviations and long forms

scientific article (publication date: 2011)

BioBenchmark Toyama 2012: an evaluation of the performance of triple stores on biological data

scientific article (publication date: 2014)

BioHackJP 2023 Report R4: integration of glyco data with chemo-, geno-, lipid-omics and pathway data

BioHackathon 2015: Semantics of data for life sciences and reproducible research

scientific article published on 24 February 2020

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

scientific article (publication date: 5 February 2014)

BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services

scientific article

Biomedical knowledge navigation by literature clustering

scientific article published on 05 August 2006

Building Linked Open Data of Life Science Dictionary ⬇️

Building Linked Open Data towards integration of biomedical scientific literature with DBpedia

scientific article (publication date: 13 March 2013)

Building linked open data using approximate string matching methods and domain specific resources

Choosing preferable labels for the Japanese translation of the Human Phenotype Ontology

scientific article published on 18 June 2020

Colil: a database and search service for citation contexts in the life sciences domain

scientific article (publication date: 2015)

D2RQ Mapper ⬇️

Discriminative Application of String Similarity Methods to Chemical and Non-chemical Names for Biomedical Abbreviation Clustering

Discriminative Optimization of String Similarity and Its Application to Biomedical Abbreviation Clustering

Discriminative application of string similarity methods to chemical and non-chemical names for biomedical abbreviation clustering

scientific article

Efficiently Finding Paths Between Classes to Build a SPARQL Query for Life-Science Databases

Figure classification in biomedical literature to elucidate disease mechanisms, based on pathways

scientific article published on 27 April 2010

Finding RDF Data you need by Umaka Suite ⬇️

Integrated Growth Media Database by Standardizing Ingredient Information ⬇️

Natural Language Query Processing for Life Science Knowledge

OReFiL: an online resource finder for life sciences

scientific article (publication date: 6 August 2007)

Online tools for efficient paper writing

scientific article published on 06 June 2022

PubCaseFinder: A Case-Report-Based, Phenotype-Driven Differential-Diagnosis System for Rare Diseases

Semantic Data Acquisition by Traversing Class–Class Relationships Over Linked Open Data

Semantic Graph Analysis for Federated LOD Surfing in Life Sciences

Split4Blank: Maintaining consistency while improving efficiency of loading RDF data with blank nodes

scientific article published on 04 June 2019

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications

scientific article

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

scientific article (publication date: 11 February 2013)

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

scientific article (publication date: 21 August 2010)

The Human Phenotype Ontology in 2024: phenotypes around the world

scientific article published in 2023

TogoDoc server/client system: smart recommendation and efficient management of life science literature

scientific article (publication date: 13 December 2010)

UmakaData Extension: Toward Realization of a Practical SPARQL Endpoint Discovery Service for Life Sciences ⬇️

YummyData: providing high-quality open life science data.

scientific article

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