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List of works by James Breen

A highly conserved gene island of three genes on chromosome 3B of hexaploid wheat: diverse gene function and genomic structure maintained in a tightly linked block

scientific article

A major invasion of transposable elements accounts for the large size of the Blumeria graminis f.sp. tritici genome

scientific article

A multiple resistance locus on chromosome arm 3BS in wheat confers resistance to stem rust (Sr2), leaf rust (Lr27) and powdery mildew

scientific article published on 15 May 2011

A physical map of the short arm of wheat chromosome 1A.

scientific article

Accelerated placental aging in early onset preeclampsia pregnancies identified by DNA methylation.

scientific article published on 29 November 2016

An accurate DNA marker assay for stem rust resistance gene Sr2 in wheat

article

Ancient plant DNA in the genomic era

article

Antarctic eukaryotic soil diversity of the Prince Charles Mountains revealed by high-throughput sequencing

Ceasing exercise induces depression-like, anxiety-like, and impaired cognitive-like behaviours and altered hippocampal gene expression

scientific article published on 28 February 2019

Effects of aging on the motor, cognitive and affective behaviors, neuroimmune responses and hippocampal gene expression

scientific article published on 24 January 2020

Epigenetic regulation of sex ratios may explain natural variation in self-fertilization rates.

scientific article published in November 2015

Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRASG13D

scientific article published on 24 January 2020

Germin-like proteins (GLPs) in cereal genomes: gene clustering and dynamic roles in plant defence.

scientific article published on 04 August 2010

Global DNA Methylation Patterns Can Play a Role in Defining Terroir in Grapevine (Vitis vinifera cv. Shiraz).

scientific article published on 30 October 2017

Haemoglobin expression in in vivo murine preimplantation embryos suggests a role in oxygen-regulated gene expression

article

It takes a community to conceive: an analysis of the scope, nature and accuracy of online sources of health information for couples trying to conceive

scientific article published on 05 October 2019

Laboratory contamination over time during low-biomass sample analysis

scientific article published on 29 April 2019

Large Scale Gene Expression Meta-Analysis Reveals Tissue-Specific, Sex-Biased Gene Expression in Humans.

scientific article published on 13 October 2016

Large-scale transcriptome-wide profiling of microRNAs in human placenta and maternal plasma at early to mid gestation

scientific article published on 19 August 2021

Major haplotype divergence including multiple germin-like protein genes, at the wheat Sr2 adult plant stem rust resistance locus

scientific article

Megabase level sequencing reveals contrasted organization and evolution patterns of the wheat gene and transposable element spaces

scientific article published on 25 June 2010

Megafaunal isotopes reveal role of increased moisture on rangeland during late Pleistocene extinctions

scientific article (publication date: 18 April 2017)

Neanderthal behaviour, diet, and disease inferred from ancient DNA in dental calculus

scientific article

New tricks for old wheat

scientific article published on 01 November 2019

Phototactic tails: Evolution and molecular basis of a novel sensory trait in sea snakes

scientific article published on 15 February 2019

Placental Inflammasome mRNA Levels Differ by Mode of Delivery and Fetal Sex

scientific article published on 25 March 2022

Placental Transcription Profiling in 6-23 Weeks' Gestation Reveals Differential Transcript Usage in Early Development

scientific article published on 19 April 2022

Podocalyxin promotes an impermeable epithelium and inhibits pro-implantation factors to negatively regulate endometrial receptivity

scientific article published on 14 December 2021

Predicting the origin of soil evidence: High throughput eukaryote sequencing and MIR spectroscopy applied to a crime scene scenario

scientific article published on 23 March 2015

Quality control measures for placental sample purity in DNA methylation array analyses

scientific article published on 17 September 2019

RNA Sequencing of Lens Capsular Epithelium Implicates Novel Pathways in Pseudoexfoliation Syndrome

scientific article published on 01 March 2022

Recent insertion of a 52-kb mitochondrial DNA segment in the wheat lineage

scientific article

Recent progress towards understanding the role of DNA methylation in human placental development

scientific article

Repeat-length variation in a wheat cellulose synthase-like gene is associated with altered tiller number and stem cell wall composition.

scientific article published on 28 March 2017

Short-term environmental enrichment, and not physical exercise, alleviate cognitive decline and anxiety from middle age onwards without affecting hippocampal gene expression

scientific article published on 01 October 2019

Specific growth conditions induce a Streptococcus pneumoniae non-mucoidal, Small Colony Variant and determine the outcome of its co-culture with Haemophilus influenzae

article

The effects of short-term and long-term environmental enrichment on locomotion, mood-like behavior, cognition and hippocampal gene expression

scientific article published on 17 April 2019

The mTORC1 complex in pre-osteoblasts regulates whole-body energy metabolism independently of osteocalcin

scientific article published on 08 February 2021

The maize disease resistance gene Htn1 against northern corn leaf blight encodes a wall-associated receptor-like kinase

scientific article published on 29 June 2015

Tissue-specific progesterone receptor-chromatin binding and the regulation of progesterone-dependent gene expression

scientific article published on 19 August 2019

Transcriptomic analysis of the seminal vesicle response to the reproductive toxicant acrylamide

scientific article published on 08 October 2021

Unravelling the molecular basis for regulatory T-cell plasticity and loss of function in disease

scientific article published on 27 February 2018

Wheat beta-expansin (EXPB11) genes: Identification of the expressed gene on chromosome 3BS carrying a pollen allergen domain

scientific article

msgbsR: An R package for analysing methylation-sensitive restriction enzyme sequencing data

scientific article published in February 2018

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