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List of works by Gael Pérez Rodríguez

A network perspective on antimicrobial peptide combination therapies: the potential of colistin, polymyxin B and nisin.

scientific article published on 27 April 2017

Agent-based model of diffusion of N-acyl homoserine lactones in a multicellular environment of Pseudomonas aeruginosa and Candida albicans

scientific article published on 08 March 2018

Agent-based spatiotemporal simulation of biomolecular systems within the open source MASON framework.

scientific article

Application of agent-based modelling to assess single-molecule transport across the cell envelope of E. coli

scientific article published on 02 March 2019

BEW: Bioinformatics Workbench for Analysis of Biofilms Experimental Data

Collaborative relation annotation and quality analysis in Markyt environment.

scientific article published in January 2017

Computational resources and strategies to construct single-molecule metabolic models of microbial cells

scientific article

Construction of antimicrobial peptide-drug combination networks from scientific literature based on a semi-automated curation workflow.

scientific article published on 26 December 2016

Enabling systematic, harmonised and large-scale biofilms data computation: the Biofilms Experiment Workbench.

scientific article

Exploring Anti-Quorum Sensing and Anti-Virulence Based Strategies to fight Candida albicans infections: an in silico approach.

scientific article published on 6 March 2018

From amino acid sequence to bioactivity: The biomedical potential of antitumor peptides.

scientific article published on 24 March 2016

High performance computing for three-dimensional agent-based molecular models

scientific article published on 8 June 2016

Next generation community assessment of biomedical entity recognition web servers: metrics, performance, interoperability aspects of BeCalm

scientific article published on 24 June 2019

Quorum sensing inhibition in Pseudomonas aeruginosa biofilms: new insights through network mining.

scientific article published on 25 January 2017

Single Molecule Simulation of Diffusion and Enzyme Kinetics.

scientific article published on 6 April 2016

The Complexity of Promoter Regions Based on a Vector Topological Entropy

The Markyt visualisation, prediction and benchmark platform for chemical and gene entity recognition at BioCreative/CHEMDNER challenge

scientific article

Using Twitter to Understand the Human Bowel Disease Community: Exploratory Analysis of Key Topics

scientific article published on 15 August 2019

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