List of works - Naoaki Ono

An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays.

scientific article

Classification of alkaloids according to the starting substances of their biosynthetic pathways using graph convolutional neural networks

scientific article published on 09 July 2019

Classification of lung adenocarcinoma transcriptome subtypes from pathological images using deep convolutional networks

scientific article published on 29 August 2018

Comparison of Sequence Reads Obtained from Three Next-Generation Sequencing Platforms ⬇️

scientific article published on May 17, 2011

Cooperative adaptation to establishment of a synthetic bacterial mutualism

scientific article

Data Mining Methods for Omics and Knowledge of Crude Medicinal Plants toward Big Data Biology

scientific article

Development of a physical model-based algorithm for the detection of single-nucleotide substitutions by using tiling microarrays

scientific article

Divergence of metabolites in three phylogenetically close Monascus species (M. pilosus, M. ruber, and M. purpureus) based on secondary metabolite biosynthetic gene clusters

scientific article published on 01 October 2020

Experimental optimization of probe length to increase the sequence specificity of high-density oligonucleotide microarrays.

scientific article

Global/temporal gene expression analysis of Escherichia coli in the early stages of symbiotic relationship development with the cellular slime mold Dictyostelium discoideum.

scientific article

Induction of neuron-like tubes and liposome networks by cooperative effect of gangliosides and phospholipids

scientific article published on 01 January 2003

Insight into the sequence specificity of a probe on an Affymetrix GeneChip by titration experiments using only one oligonucleotide.

scientific article published on 4 September 2007

KNApSAcK Metabolite Activity Database for retrieving the relationships between metabolites and biological activities.

scientific article

KNApSAcK-3D: A Three-Dimensional Structure Database of Plant Metabolites ⬇️

scientific article published on January 3, 2013

Model-based analysis of non-specific binding for background correction of high-density oligonucleotide microarrays.

scientific article

SS-mPMG and SS-GA: tools for finding pathways and dynamic simulation of metabolic networks.

scientific article published on 9 April 2013

Several necessary conditions for the evolution of complex forms of life in an artificial environment.

scientific article

Systematization of the Protein Sequence Diversity in Enzymes Related to Secondary Metabolic Pathways in Plants, in the Context of Big Data Biology Inspired by the KNApSAcK Motorcycle Database ⬇️

scientific article published on March 18, 2013

Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress

scientific article

Transition from positive to neutral in mutation fixation along with continuing rising fitness in thermal adaptive evolution.

scientific article

List of works by Naoaki Ono

An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays.

Classification of alkaloids according to the starting substances of their biosynthetic pathways using graph convolutional neural networks

Classification of lung adenocarcinoma transcriptome subtypes from pathological images using deep convolutional networks

Comparison of Sequence Reads Obtained from Three Next-Generation Sequencing Platforms ⬇️

Cooperative adaptation to establishment of a synthetic bacterial mutualism

Data Mining Methods for Omics and Knowledge of Crude Medicinal Plants toward Big Data Biology

Development of a physical model-based algorithm for the detection of single-nucleotide substitutions by using tiling microarrays

Divergence of metabolites in three phylogenetically close Monascus species (M. pilosus, M. ruber, and M. purpureus) based on secondary metabolite biosynthetic gene clusters

Experimental optimization of probe length to increase the sequence specificity of high-density oligonucleotide microarrays.

Global/temporal gene expression analysis of Escherichia coli in the early stages of symbiotic relationship development with the cellular slime mold Dictyostelium discoideum.

Induction of neuron-like tubes and liposome networks by cooperative effect of gangliosides and phospholipids

Insight into the sequence specificity of a probe on an Affymetrix GeneChip by titration experiments using only one oligonucleotide.

KNApSAcK Metabolite Activity Database for retrieving the relationships between metabolites and biological activities.

KNApSAcK-3D: A Three-Dimensional Structure Database of Plant Metabolites ⬇️

Model-based analysis of non-specific binding for background correction of high-density oligonucleotide microarrays.

SS-mPMG and SS-GA: tools for finding pathways and dynamic simulation of metabolic networks.

Several necessary conditions for the evolution of complex forms of life in an artificial environment.

Systematization of the Protein Sequence Diversity in Enzymes Related to Secondary Metabolic Pathways in Plants, in the Context of Big Data Biology Inspired by the KNApSAcK Motorcycle Database ⬇️

Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress

Transition from positive to neutral in mutation fixation along with continuing rising fitness in thermal adaptive evolution.