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List of works by Ulrik Fahnøe

A fast and robust method for full genome sequencing of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) Type 1 and Type 2.

scientific article published on 24 July 2013

A fast and robust method for whole genome sequencing of the Aleutian Mink Disease Virus (AMDV) genome

scientific article published on 6 April 2016

A near full-length open reading frame next generation sequencing assay for genotyping and identification of resistance-associated variants in hepatitis C virus

scholarly article by M S Pedersen et al published August 2018 in Journal of Clinical Virology

Analysis of classical swine fever virus RNA replication determinants using replicons

scientific article published on 11 April 2013

Complete genome sequence of border disease virus genotype 3 strain gifhorn

scientific article published on 16 January 2014

Complete genome sequence of classical Swine Fever virus genotype 2.2 strain bergen

scientific article

Creation of Functional Viruses from Non-Functional cDNA Clones Obtained from an RNA Virus Population by the Use of Ancestral Reconstruction

scientific article published on 20 October 2015

Deoxynucleoside Salvage in Fission Yeast Allows Rescue of Ribonucleotide Reductase Deficiency but Not Spd1-Mediated Inhibition of Replication

scientific article

Determinants of the VP1/2A junction cleavage by the 3C protease in foot-and-mouth disease virus-infected cells

scientific article

Direct acting antiviral treatment of chronic hepatitis C in Denmark: factors associated with and barriers to treatment initiation

scholarly article by Christina Sølund et al published 2 May 2018 in Scandinavian Journal of Gastroenterology

Distinct roles for the IIId2 sub-domain in pestivirus and picornavirus internal ribosome entry sites ⬇️

scientific article

Efficient generation of recombinant RNA viruses using targeted recombination-mediated mutagenesis of bacterial artificial chromosomes containing full-length cDNA.

scientific article

Equine pegiviruses cause persistent infection of bone marrow and are not associated with hepatitis

scientific article published on 10 July 2020

Evolutionary Pathways to Persistence of Highly Fit and Resistant Hepatitis C Virus Protease Inhibitor Escape Variants

scientific article published on 05 June 2019

Full-Length Open Reading Frame Amplification of Hepatitis C Virus

Global evolutionary analysis of chronic hepatitis C patients revealed significant effect of baseline viral resistance, including novel non-target sites, for DAA-based treatment and retreatment outcome

scientific article published on 31 October 2020

HCV Genotype 6a Escape from and Resistance to Velpatasvir, Pibrentasvir, and Sofosbuvir in Robust Infectious Cell Culture Models

scientific article published on 15 February 2018

HCV genotype 1-6 NS3 residue 80 substitutions impact protease inhibitor activity and promote viral escape

High density Huh7.5 cell hollow fiber bioreactor culture for high-yield production of hepatitis C virus and studies of antivirals

scientific article published in Scientific Reports

In vitro efficacy of artemisinin-based treatments against SARS-CoV-2

scientific article published on 16 July 2021

Mouse models of acute and chronic hepacivirus infection.

scientific article published on July 2017

Neutralisation titres against SARS-CoV-2 are sustained 6 months after onset of symptoms in individuals with mild COVID-19

scientific article published on 19 August 2021

Outcome and adverse events in patients with chronic hepatitis C treated with direct-acting antivirals: a clinical randomized study

scientific article published on 01 October 2018

Overcoming Culture Restriction for SARS-CoV-2 in Human Cells Facilitates the Screening of Compounds Inhibiting Viral Replication

scientific article

Pathogenesis, MicroRNA-122 Gene-Regulation, and Protective Immune Responses After Acute Equine Hepacivirus Infection

scientific article published on 11 June 2021

Rescue of the highly virulent classical swine fever virus strain "Koslov" from cloned cDNA and first insights into genome variations relevant for virulence

scientific article published on 19 September 2014

Ribavirin inhibition of cell-culture infectious hepatitis C genotype 1-3 viruses is strain-dependent

scientific article published on 28 September 2019

Ribavirin-induced mutagenesis across the complete open reading frame of hepatitis C virus genotypes 1a and 3a

article by Niels Mejer et al published 1 August 2018 in Journal of General Virology

Sequence adaptations during growth of rescued classical swine fever viruses in cell culture and within infected pigs

scientific article published on 7 July 2016

Spd2 assists Spd1 in the modulation of ribonucleotide reductase architecture but does not regulate deoxynucleotide pools.

scientific article published on 20 March 2014

Strategy for efficient generation of numerous full-length cDNA clones of classical swine fever virus for haplotyping

Studies on genetic diversity of bovine viral diarrhea viruses in Danish cattle herds

scientific article published on 8 December 2013

Virus Adaptation and Selection Following Challenge of Animals Vaccinated against Classical Swine Fever Virus

scientific article published on 10 October 2019

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