List of works - Ignacio Aguilar

Accuracy of estimated breeding values with genomic information on males, females, or both: an example on broiler chicken

scientific article published on 2 July 2015

Analyses of reaction norms reveal new chromosome regions associated with tick resistance in cattle.

scientific article published on 13 July 2017

Ancestral Relationships Using Metafounders: Finite Ancestral Populations and Across Population Relationships

scientific article published on 14 April 2015

Application of single step genomic BLUP under different uncertain paternity scenarios using simulated data

scientific article published on 28 September 2017

Are evaluations on young genotyped animals benefiting from the past generations?

scientific article published on 27 March 2014

Autoregressive and random regression test-day models for multiple lactations in genetic evaluation of Brazilian Holstein cattle

scientific article published on 08 December 2019

Bias in genomic predictions for populations under selection.

scientific article

Breeding and Genetics Symposium: really big data: processing and analysis of very large data sets

scientific article

Changes in variance explained by top SNP windows over generations for three traits in broiler chicken

scientific article

Effects of ignoring inbreeding in model-based accuracy for BLUP and SSGBLUP

scientific article published on 20 February 2020

Efficient computation of the genomic relationship matrix and other matrices used in single-step evaluation.

scientific article

Evaluation of a multi-line broiler chicken population using a single-step genomic evaluation procedure

scientific article published on 05 July 2011

Evaluation of the utility of diagonal elements of the genomic relationship matrix as a diagnostic tool to detect mislabelled genotyped animals in a broiler chicken population

scientific article published on 20 April 2011

Frequentist p-values for large-scale-single step genome-wide association, with an application to birth weight in American Angus cattle.

scientific article

Genetic dissection of reproductive performance of dairy cows under heat stress

scientific article published on 03 May 2020

Genetic evaluation of growth in a multibreed beef cattle population using random regression-linear spline models

scientific article published on 26 October 2007

Genetic evaluation using single-step genomic best linear unbiased predictor in American Angus.

scientific article published in June 2015

Genome-wide association between single nucleotide polymorphisms with beef fatty acid profile in Nellore cattle using the single step procedure.

scientific article

Genome-wide association mapping including phenotypes from relatives without genotypes in a single-step (ssGWAS) for 6-week body weight in broiler chickens.

scientific article

Genome-wide marker-assisted selection combining all pedigree phenotypic information with genotypic data in one step: An example using broiler chickens

scientific article

Genomic prediction ability for beef fatty acid profile in Nelore cattle using different pseudo-phenotypes

scientific article published on 24 September 2018

Genomic prediction for tick resistance in Braford and Hereford cattle

scientific article

Genomic variation and population structure detected by single nucleotide polymorphism arrays in Corriedale, Merino and Creole sheep.

scientific article

Genotype by environment interaction for tick resistance of Hereford and Braford beef cattle using reaction norm models.

scientific article

Hot topic: Use of genomic recursions in single-step genomic best linear unbiased predictor (BLUP) with a large number of genotypes

scientific article published on 8 April 2015

Hot topic: a unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score.

scientific article

Implementation of genomic recursions in single-step genomic best linear unbiased predictor for US Holsteins with a large number of genotyped animals.

scientific article

Implications of SNP weighting on single-step genomic predictions for different reference population sizes

scientific article

Methods for genomic evaluation of a relatively small genotyped dairy population and effect of genotyped cow information in multiparity analyses

scientific article published on 25 January 2014

Methods to approximate reliabilities in single-step genomic evaluation.

scientific article published on 3 November 2012

Multiple trait genomic evaluation of conception rate in Holsteins

scientific article published on 01 May 2011

Multiple-trait genomic evaluation of linear type traits using genomic and phenotypic data in US Holsteins

scientific article

Prediction accuracy for a simulated maternally affected trait of beef cattle using different genomic evaluation models.

scientific article

Quality control of genotypes using heritability estimates of gene content at the marker

scientific article published on 6 January 2015

Resource allocation optimization with multi-trait genomic prediction for bread wheat (Triticum aestivum L.) baking quality.

scientific article published on 19 September 2018

Short communication: Methods to compute genomic inbreeding for ungenotyped individuals

scientific article published on 11 February 2020

Short communication: genetic trends of milk yield under heat stress for US Holsteins.

scientific article

Single-Step Genomic Evaluations from Theory to Practice: Using SNP Chips and Sequence Data in BLUPF90

scientific article published on 14 July 2020

Technical note: Acceleration of sparse operations for average-information REML analyses with supernodal methods and sparse-storage refinements.

scientific article published on October 2015

Unknown-parent groups in single-step genomic evaluation.

scientific article published on 17 January 2013

Use of genomic recursions and algorithm for proven and young animals for single-step genomic BLUP analyses--a simulation study

scientific article published on 10 April 2015

Using recursion to compute the inverse of the genomic relationship matrix.

scientific article published on 27 March 2014

Weighted genomic prediction for growth and disease resistant traits in a Eucalyptus globulus breeding population

scientific article published in 2023

Weighting Strategies for Single-Step Genomic BLUP: An Iterative Approach for Accurate Calculation of GEBV and GWAS

scientific article published on 19 August 2016

Whole Genome Mapping Reveals Novel Genes and Pathways Involved in Milk Production Under Heat Stress in US Holstein Cows

scientific article published on 04 October 2019

List of works by Ignacio Aguilar

Accuracy of estimated breeding values with genomic information on males, females, or both: an example on broiler chicken

Analyses of reaction norms reveal new chromosome regions associated with tick resistance in cattle.

Ancestral Relationships Using Metafounders: Finite Ancestral Populations and Across Population Relationships

Application of single step genomic BLUP under different uncertain paternity scenarios using simulated data

Are evaluations on young genotyped animals benefiting from the past generations?

Autoregressive and random regression test-day models for multiple lactations in genetic evaluation of Brazilian Holstein cattle

Bias in genomic predictions for populations under selection.

Breeding and Genetics Symposium: really big data: processing and analysis of very large data sets

Changes in variance explained by top SNP windows over generations for three traits in broiler chicken

Effects of ignoring inbreeding in model-based accuracy for BLUP and SSGBLUP

Efficient computation of the genomic relationship matrix and other matrices used in single-step evaluation.

Evaluation of a multi-line broiler chicken population using a single-step genomic evaluation procedure

Evaluation of the utility of diagonal elements of the genomic relationship matrix as a diagnostic tool to detect mislabelled genotyped animals in a broiler chicken population

Frequentist p-values for large-scale-single step genome-wide association, with an application to birth weight in American Angus cattle.

Genetic dissection of reproductive performance of dairy cows under heat stress

Genetic evaluation of growth in a multibreed beef cattle population using random regression-linear spline models

Genetic evaluation using single-step genomic best linear unbiased predictor in American Angus.

Genome-wide association between single nucleotide polymorphisms with beef fatty acid profile in Nellore cattle using the single step procedure.

Genome-wide association mapping including phenotypes from relatives without genotypes in a single-step (ssGWAS) for 6-week body weight in broiler chickens.

Genome-wide marker-assisted selection combining all pedigree phenotypic information with genotypic data in one step: An example using broiler chickens

Genomic prediction ability for beef fatty acid profile in Nelore cattle using different pseudo-phenotypes

Genomic prediction for tick resistance in Braford and Hereford cattle

Genomic variation and population structure detected by single nucleotide polymorphism arrays in Corriedale, Merino and Creole sheep.

Genotype by environment interaction for tick resistance of Hereford and Braford beef cattle using reaction norm models.

Hot topic: Use of genomic recursions in single-step genomic best linear unbiased predictor (BLUP) with a large number of genotypes

Hot topic: a unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score.

Implementation of genomic recursions in single-step genomic best linear unbiased predictor for US Holsteins with a large number of genotyped animals.

Implications of SNP weighting on single-step genomic predictions for different reference population sizes

Methods for genomic evaluation of a relatively small genotyped dairy population and effect of genotyped cow information in multiparity analyses

Methods to approximate reliabilities in single-step genomic evaluation.

Multiple trait genomic evaluation of conception rate in Holsteins

Multiple-trait genomic evaluation of linear type traits using genomic and phenotypic data in US Holsteins

Prediction accuracy for a simulated maternally affected trait of beef cattle using different genomic evaluation models.

Quality control of genotypes using heritability estimates of gene content at the marker

Resource allocation optimization with multi-trait genomic prediction for bread wheat (Triticum aestivum L.) baking quality.

Short communication: Methods to compute genomic inbreeding for ungenotyped individuals

Short communication: genetic trends of milk yield under heat stress for US Holsteins.

Single-Step Genomic Evaluations from Theory to Practice: Using SNP Chips and Sequence Data in BLUPF90

Technical note: Acceleration of sparse operations for average-information REML analyses with supernodal methods and sparse-storage refinements.

Unknown-parent groups in single-step genomic evaluation.

Use of genomic recursions and algorithm for proven and young animals for single-step genomic BLUP analyses--a simulation study

Using recursion to compute the inverse of the genomic relationship matrix.

Weighted genomic prediction for growth and disease resistant traits in a Eucalyptus globulus breeding population

Weighting Strategies for Single-Step Genomic BLUP: An Iterative Approach for Accurate Calculation of GEBV and GWAS

Whole Genome Mapping Reveals Novel Genes and Pathways Involved in Milk Production Under Heat Stress in US Holstein Cows