List of works - Chikara Sato

A sodium channel model

scientific article published on 01 December 1993

A statistically harmonized alignment-classification in image space enables accurate and robust alignment of noisy images in single particle analysis.

scientific article

An automatic particle pickup method using a neural network applicable to low-contrast electron micrographs.

scientific article published in December 2001

Assembly of protein complexes restricts diffusion of Wnt3a proteins

scientific article published on 10 October 2018

Atmospheric scanning electron microscope for correlative microscopy.

scientific article

Atmospheric scanning electron microscope system with an open sample chamber: configuration and applications

scientific article

Automatic particle pickup method using a neural network has high accuracy by applying an initial weight derived from eigenimages: a new reference free method for single-particle analysis.

scientific article published in January 2004

Calcium phosphate mineralization in bone tissues directly observed in aqueous liquid by atmospheric SEM (ASEM) without staining: microfluidics crystallization chamber and immuno-EM

scientific article published on 14 May 2019

Conformational changes in tubulin in GMPCPP and GDP-taxol microtubules observed by cryoelectron microscopy.

scientific article

Conformational variation of the translocon enhancing chaperone SecDF.

scientific article

Crystal structure of the CRISPR-Cas RNA silencing Cmr complex bound to a target analog

scientific article

Crystal structure of the Csm3-Csm4 subcomplex in the type III-A CRISPR-Cas interference complex

scientific article

Cutting Edge: Class II-like Structural Features and Strong Receptor Binding of the Nonclassical HLA-G2 Isoform Homodimer.

scientific article published on 27 March 2017

DNA Origami Scaffolds as Templates for Functional Tetrameric Kir3 K+ Channels.

scientific article published on 16 January 2018

Expression, purification, crystallization and preliminary crystallographic analysis of hepatitis B virus core protein dimerized via a peptide linker containing an EGFP insertion.

scientific article published on 27 July 2013

Imaging of immunogold labeling in cells and tissues by helium ion microscopy.

scientific article

Immuno EM-OM correlative microscopy in solution by atmospheric scanning electron microscopy (ASEM).

scientific article

Inositol 1,4,5-trisphosphate receptor contains multiple cavities and L-shaped ligand-binding domains.

scientific article

Keap1 is a forked-stem dimer structure with two large spheres enclosing the intervening, double glycine repeat, and C-terminal domains

scientific article

Lipid environment of membrane proteins in cryo-EM based structural analysis

scientific article published on 18 December 2017

Low cholesterol triggers membrane microdomain-dependent CD44 shedding and suppresses tumor cell migration.

scientific article

Mice lacking the intracellular cation channel TRIC-B have compromised collagen production and impaired bone mineralization

scientific article published on 17 May 2016

Mitsugumin 23 Forms a Massive Bowl-Shaped Assembly and Cation-Conducting Channel ⬇️

scientific article published on March 7, 2011

Mucin-type core 1 glycans regulate the localization of neuromuscular junctions and establishment of muscle cell architecture in Drosophila.

scientific article published on 16 February 2016

Multi-reference-based multiple alignment statistics enables accurate protein-particle pickup from noisy images ⬇️

scientific article published on November 21, 2012

Neuronal specificity of subtype SQSC1 of squid putative sodium channel

scientific article published on 01 January 1995

New simulated annealing approach considering helix bending applied to determine the 8.8Å structure of 15-protofilament microtubules.

scientific article published on September 2014

Novel convergence-oriented approach for evaluation and optimization of workflow in single-particle two-dimensional averaging of electron microscope images.

scientific article

Positively charged nanogold label allows the observation of fine cell filopodia and flagella in solution by atmospheric scanning electron microscopy

scientific article

Primary structure of squid sodium channel deduced from the complementary DNA sequence

scientific article published on July 15, 1992

RECK forms cowbell-shaped dimers and inhibits matrix metalloproteinase-catalyzed cleavage of fibronectin.

scientific article

Rapid imaging of mycoplasma in solution using Atmospheric Scanning Electron Microscopy (ASEM).

scientific article

Reconstruction of the P2X(2) receptor reveals a vase-shaped structure with lateral tunnels above the membrane.

scientific article

Redundant and Distinct Roles of Secreted Protein Eap and Cell Wall-Anchored Protein SasG in Biofilm Formation and Pathogenicity of Staphylococcus aureus

scientific article published on 25 March 2019

Reply to Thinnes: Is There Competition in Trafficking of VDAC-cored VRAC and SOC in NE Differentiation of Cells?

scientific article published in June 2009

Reprint of: Atmospheric scanning electron microscope observes cells and tissues in open medium through silicon nitride film.

scientific article

Short stop mediates axonal compartmentalization of mucin-type core 1 glycans.

scientific article published on 02 February 2017

Single particle reconstruction of membrane proteins: a tool for understanding the 3D structure of disease-related macromolecules.

scientific article published on 17 March 2010

Stimulus-related activity during conditional associations in monkey perirhinal cortex neurons depends on upcoming reward outcome

scientific article published in November 2012

Structure of six-transmembrane cation channels revealed by single-particle analysis from electron microscopic images.

scientific article

Substrate regulation of calcium binding in Ca2+-ATPase molecules of the sarcoplasmic reticulum. I. Effect of ATP.

scientific article published on 25 April 2002

Substrate regulation of calcium binding in Ca2+-ATPase molecules of the sarcoplasmic reticulum. II. Effect of CTP, GTP, ITP, and UTP.

scientific article published on 25 April 2002

Subunit dissociation of TRPC3 ion channel under high-salt condition.

scientific article

Susceptibility test of two Ca(2+)-ATPase conformers to denaturants and polyols to outline their structural difference.

scientific article published on 3 November 2012

TRIC channels are essential for Ca2+ handling in intracellular stores.

scientific article published in July 2007

Tetrameric Orai1 is a teardrop-shaped molecule with a long, tapered cytoplasmic domain

scientific article

The Atmospheric Scanning Electron Microscope with open sample space observes dynamic phenomena in liquid or gas.

scientific article

The motor protein prestin is a bullet-shaped molecule with inner cavities

scientific journal article

The non-selective cation-permeable channel TRPC3 is a tetrahedron with a cap on the large cytoplasmic end

scientific article published on 01 August 2005

Three-dimensional reconstruction of human cystic fibrosis transmembrane conductance regulator chloride channel revealed an ellipsoidal structure with orifices beneath the putative transmembrane domain

scientific article published on 22 August 2008

Three-dimensional reconstruction using transmission electron microscopy reveals a swollen, bell-shaped structure of transient receptor potential melastatin type 2 cation channel.

scientific article

Three-dimensional structure of the signal peptide peptidase

scientific article

Three-dimensional structure of the γ-secretase complex

scientific article published on 09 March 2006

Topology representing network enables highly accurate classification of protein images taken by cryo electron-microscope without masking.

scientific article

Visualization of the trimeric P2X2 receptor with a crown-capped extracellular domain

scientific article published on 03 October 2005

X-ray and Cryo-EM structures reveal mutual conformational changes of Kinesin and GTP-state microtubules upon binding

scientific article published on 16 March 2015

yam8(+), a Schizosaccharomyces pombe gene, is a potential homologue of the Saccharomyces cerevisiae MID1 gene encoding a stretch-activated Ca(2+)-permeable channel

scientific article published on 01 March 2000

List of works by Chikara Sato

A sodium channel model

A statistically harmonized alignment-classification in image space enables accurate and robust alignment of noisy images in single particle analysis.

An automatic particle pickup method using a neural network applicable to low-contrast electron micrographs.

Assembly of protein complexes restricts diffusion of Wnt3a proteins

Atmospheric scanning electron microscope for correlative microscopy.

Atmospheric scanning electron microscope system with an open sample chamber: configuration and applications

Automatic particle pickup method using a neural network has high accuracy by applying an initial weight derived from eigenimages: a new reference free method for single-particle analysis.

Calcium phosphate mineralization in bone tissues directly observed in aqueous liquid by atmospheric SEM (ASEM) without staining: microfluidics crystallization chamber and immuno-EM

Conformational changes in tubulin in GMPCPP and GDP-taxol microtubules observed by cryoelectron microscopy.

Conformational variation of the translocon enhancing chaperone SecDF.

Crystal structure of the CRISPR-Cas RNA silencing Cmr complex bound to a target analog

Crystal structure of the Csm3-Csm4 subcomplex in the type III-A CRISPR-Cas interference complex

Cutting Edge: Class II-like Structural Features and Strong Receptor Binding of the Nonclassical HLA-G2 Isoform Homodimer.

DNA Origami Scaffolds as Templates for Functional Tetrameric Kir3 K+ Channels.

Expression, purification, crystallization and preliminary crystallographic analysis of hepatitis B virus core protein dimerized via a peptide linker containing an EGFP insertion.

Imaging of immunogold labeling in cells and tissues by helium ion microscopy.

Immuno EM-OM correlative microscopy in solution by atmospheric scanning electron microscopy (ASEM).

Inositol 1,4,5-trisphosphate receptor contains multiple cavities and L-shaped ligand-binding domains.

Keap1 is a forked-stem dimer structure with two large spheres enclosing the intervening, double glycine repeat, and C-terminal domains

Lipid environment of membrane proteins in cryo-EM based structural analysis

Low cholesterol triggers membrane microdomain-dependent CD44 shedding and suppresses tumor cell migration.

Mice lacking the intracellular cation channel TRIC-B have compromised collagen production and impaired bone mineralization

Mitsugumin 23 Forms a Massive Bowl-Shaped Assembly and Cation-Conducting Channel ⬇️

Mucin-type core 1 glycans regulate the localization of neuromuscular junctions and establishment of muscle cell architecture in Drosophila.

Multi-reference-based multiple alignment statistics enables accurate protein-particle pickup from noisy images ⬇️

Neuronal specificity of subtype SQSC1 of squid putative sodium channel

New simulated annealing approach considering helix bending applied to determine the 8.8Å structure of 15-protofilament microtubules.

Novel convergence-oriented approach for evaluation and optimization of workflow in single-particle two-dimensional averaging of electron microscope images.

Positively charged nanogold label allows the observation of fine cell filopodia and flagella in solution by atmospheric scanning electron microscopy

Primary structure of squid sodium channel deduced from the complementary DNA sequence

RECK forms cowbell-shaped dimers and inhibits matrix metalloproteinase-catalyzed cleavage of fibronectin.

Rapid imaging of mycoplasma in solution using Atmospheric Scanning Electron Microscopy (ASEM).

Reconstruction of the P2X(2) receptor reveals a vase-shaped structure with lateral tunnels above the membrane.

Redundant and Distinct Roles of Secreted Protein Eap and Cell Wall-Anchored Protein SasG in Biofilm Formation and Pathogenicity of Staphylococcus aureus

Reply to Thinnes: Is There Competition in Trafficking of VDAC-cored VRAC and SOC in NE Differentiation of Cells?

Reprint of: Atmospheric scanning electron microscope observes cells and tissues in open medium through silicon nitride film.

Short stop mediates axonal compartmentalization of mucin-type core 1 glycans.

Single particle reconstruction of membrane proteins: a tool for understanding the 3D structure of disease-related macromolecules.

Stimulus-related activity during conditional associations in monkey perirhinal cortex neurons depends on upcoming reward outcome

Structure of six-transmembrane cation channels revealed by single-particle analysis from electron microscopic images.

Substrate regulation of calcium binding in Ca2+-ATPase molecules of the sarcoplasmic reticulum. I. Effect of ATP.

Substrate regulation of calcium binding in Ca2+-ATPase molecules of the sarcoplasmic reticulum. II. Effect of CTP, GTP, ITP, and UTP.

Subunit dissociation of TRPC3 ion channel under high-salt condition.

Susceptibility test of two Ca(2+)-ATPase conformers to denaturants and polyols to outline their structural difference.

TRIC channels are essential for Ca2+ handling in intracellular stores.

Tetrameric Orai1 is a teardrop-shaped molecule with a long, tapered cytoplasmic domain

The Atmospheric Scanning Electron Microscope with open sample space observes dynamic phenomena in liquid or gas.

The motor protein prestin is a bullet-shaped molecule with inner cavities

The non-selective cation-permeable channel TRPC3 is a tetrahedron with a cap on the large cytoplasmic end

Three-dimensional reconstruction of human cystic fibrosis transmembrane conductance regulator chloride channel revealed an ellipsoidal structure with orifices beneath the putative transmembrane domain

Three-dimensional reconstruction using transmission electron microscopy reveals a swollen, bell-shaped structure of transient receptor potential melastatin type 2 cation channel.

Three-dimensional structure of the signal peptide peptidase

Three-dimensional structure of the γ-secretase complex

Topology representing network enables highly accurate classification of protein images taken by cryo electron-microscope without masking.

Visualization of the trimeric P2X2 receptor with a crown-capped extracellular domain

X-ray and Cryo-EM structures reveal mutual conformational changes of Kinesin and GTP-state microtubules upon binding

yam8(+), a Schizosaccharomyces pombe gene, is a potential homologue of the Saccharomyces cerevisiae MID1 gene encoding a stretch-activated Ca(2+)-permeable channel