List of works - Chunming Xu

CG hypomethylation leads to complex changes in DNA methylation and transpositional burst of diverse transposable elements in callus cultures of rice

scientific article published on 22 October 2019

DNA Methylation Affects Gene Alternative Splicing in Plants: An Example from Rice

scientific article published on 09 October 2015

DNA Methylation Changes Induced in Rice by Exposure to High Concentrations of the Nitric Oxide Modulator, Sodium Nitroprusside

Dramatic genotypic difference in, and effect of genetic crossing on, tissue culture-induced mobility of retrotransposon Tos17 in rice

scientific article published on 04 September 2012

Evolution of the BBAA component of bread wheat during its history at the allohexaploid level

scientific article published on 02 July 2014

Evolutionary genomics of two diploid goat grass species belonging to the section Sitopsis of Aegilops, Aegilops longissima, and Aegilops sharonensis

scientific article published in 2024

Gene-body CG methylation and divergent expression of duplicate genes in rice

scientific article

Genetic and Epigenetic Divergence of Duplicate Genes in Two Legume Species

scientific article published on 4 January 2018

Genome-wide disruption of gene expression in allopolyploids but not hybrids of rice subspecies

scientific article published on 27 February 2014

Genomewide variation in an introgression line of rice-Zizania revealed by whole-genome re-sequencing

scientific article

Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines

scientific article

Horizontal transfer of non-LTR retrotransposons from arthropods to flowering plants.

scientific article published on 23 October 2017

Induced Pib Expression and Resistance to Magnaporthe grisea are Compromised by Cytosine Demethylation at Critical Promoter Regions in Rice

scientific article published on 15 September 2011

Intrinsic karyotype stability and gene copy number variations may have laid the foundation for tetraploid wheat formation

scientific article

Limited tissue culture-induced mutations and linked epigenetic modifications in F hybrids of sorghum pure lines are accompanied by increased transcription of DNA methyltransferases and 5-methylcytosine glycosylases.

scientific article published on 17 November 2008

Molecular characterization of a rice mutator-phenotype derived from an incompatible cross-pollination reveals transgenerational mobilization of multiple transposable elements and extensive epigenetic instability

scientific article

Mutation of a major CG methylase in rice causes genome-wide hypomethylation, dysregulated genome expression, and seedling lethality.

scientific article

Nonuniform gene expression pattern detected along the longitudinal axis in the matured rice leaf

scientific article

Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat

scientific article published on 11 February 2013

Rapid and pervasive development- and tissue-specific homeolog expression partitioning in newly formed inter-subspecific rice segmental allotetraploids

article

Rapid genomic changes in polyploid wheat and related species: implications for genome evolution and genetic improvement

scientific article published on September 2009

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres

scientific article published in December 2012

Segmental allotetraploidy generates extensive homeologous expression rewiring and phenotypic diversity at the population level in rice.

scientific article published on 12 August 2017

Tissue culture-induced genetic and epigenetic alterations in rice pure-lines, F1 hybrids and polyploids

scientific article

Tissue culture-induced heritable genomic variation in rice, and their phenotypic implications

scientific article

Tissue culture-induced transpositional activity of mPing is correlated with cytosine methylation in rice

scientific article

Tissue-specific differences in cytosine methylation and their association with differential gene expression in sorghum.

scientific article published in June 2011

Transcriptome shock in an interspecific F1 triploid hybrid of Oryza revealed by RNA sequencing

scientific article published on April 2015

Transgenerational inheritance of modified DNA methylation patterns and enhanced tolerance induced by heavy metal stress in rice (Oryza sativa L.).

scientific article

List of works by Chunming Xu

CG hypomethylation leads to complex changes in DNA methylation and transpositional burst of diverse transposable elements in callus cultures of rice

DNA Methylation Affects Gene Alternative Splicing in Plants: An Example from Rice

DNA Methylation Changes Induced in Rice by Exposure to High Concentrations of the Nitric Oxide Modulator, Sodium Nitroprusside

Dramatic genotypic difference in, and effect of genetic crossing on, tissue culture-induced mobility of retrotransposon Tos17 in rice

Evolution of the BBAA component of bread wheat during its history at the allohexaploid level

Evolutionary genomics of two diploid goat grass species belonging to the section Sitopsis of <i>Aegilops</i>, <i>Aegilops longissima</i>, and <i>Aegilops sharonensis</i>

Gene-body CG methylation and divergent expression of duplicate genes in rice

Genetic and Epigenetic Divergence of Duplicate Genes in Two Legume Species

Genome-wide disruption of gene expression in allopolyploids but not hybrids of rice subspecies

Genomewide variation in an introgression line of rice-Zizania revealed by whole-genome re-sequencing

Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines

Horizontal transfer of non-LTR retrotransposons from arthropods to flowering plants.

Induced Pib Expression and Resistance to Magnaporthe grisea are Compromised by Cytosine Demethylation at Critical Promoter Regions in Rice

Intrinsic karyotype stability and gene copy number variations may have laid the foundation for tetraploid wheat formation

Limited tissue culture-induced mutations and linked epigenetic modifications in F hybrids of sorghum pure lines are accompanied by increased transcription of DNA methyltransferases and 5-methylcytosine glycosylases.

Molecular characterization of a rice mutator-phenotype derived from an incompatible cross-pollination reveals transgenerational mobilization of multiple transposable elements and extensive epigenetic instability

Mutation of a major CG methylase in rice causes genome-wide hypomethylation, dysregulated genome expression, and seedling lethality.

Nonuniform gene expression pattern detected along the longitudinal axis in the matured rice leaf

Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat

Rapid and pervasive development- and tissue-specific homeolog expression partitioning in newly formed inter-subspecific rice segmental allotetraploids

Rapid genomic changes in polyploid wheat and related species: implications for genome evolution and genetic improvement

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres

Segmental allotetraploidy generates extensive homeologous expression rewiring and phenotypic diversity at the population level in rice.

Tissue culture-induced genetic and epigenetic alterations in rice pure-lines, F1 hybrids and polyploids

Tissue culture-induced heritable genomic variation in rice, and their phenotypic implications

Tissue culture-induced transpositional activity of mPing is correlated with cytosine methylation in rice

Tissue-specific differences in cytosine methylation and their association with differential gene expression in sorghum.

Transcriptome shock in an interspecific F1 triploid hybrid of Oryza revealed by RNA sequencing

Transgenerational inheritance of modified DNA methylation patterns and enhanced tolerance induced by heavy metal stress in rice (Oryza sativa L.).