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List of works by Laura Bonati

Comparative In Vitro and In Silico Analysis of the Selectivity of Indirubin as a Human Ah Receptor Agonist

scholarly article by Samantha C Faber published in September 2018

Computational prediction and in vitro validation of VEGFR1 as a novel protein target for 2,3,7,8-tetrachlorodibenzo-p-dioxin

scientific article published on 02 May 2019

Deciphering Dimerization Modes of PAS Domains: Computational and Experimental Analyses of the AhR:ARNT Complex Reveal New Insights Into the Mechanisms of AhR Transformation

scientific article

Exploring the PXR ligand binding mechanism with advanced Molecular Dynamics methods

scientific article published in Scientific Reports

Ligand-induced perturbation of the HIF-2α:ARNT dimer dynamics

scientific article published on 28 February 2018

Metadynamics-Based Approaches for Modeling the Hypoxia-Inducible Factor 2α Ligand Binding Process

scientific article published on 04 June 2021

Modeling Binding with Large Conformational Changes: Key Points in Ensemble-Docking Approaches.

scientific article published on 15 June 2017

Modeling the binding of diverse ligands within the Ah receptor ligand binding domain

scientific article published on 23 July 2019

Molecular modeling of the AhR structure and interactions can shed light on ligand-dependent activation and transformation mechanisms

scientific article published on 01 February 2017

PathDetect-SOM: A Neural Network Approach for the Identification of Pathways in Ligand Binding Simulations

scientific article published on 25 February 2022

Reconstruction of ARNT PAS-B Unfolding Pathways by Steered Molecular Dynamics and Artificial Neural Networks

scientific article published on 29 March 2021

Structural modeling of the AhR:ARNT complex in the bHLH-PASA-PASB region elucidates the key determinants of dimerization.

scientific article published on 10 April 2017

The Cellular and Molecular Determinants of Naphthoquinone-Dependent Activation of the Aryl Hydrocarbon Receptor

scientific article published on 09 June 2020

Transitional States in Ligand-Dependent Transformation of the Aryl Hydrocarbon Receptor into Its DNA-Binding Form

scientific article published on 02 April 2020

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