List of works by Florian Gnad

A comprehensive transcriptional portrait of human cancer cell lines

scientific article published on 08 December 2014

Assessment of computational methods for predicting the effects of missense mutations in human cancers

scientific article

Bioinformatics analysis of thousands of TCGA tumors to determine the involvement of epigenetic regulators in human cancer

scientific article published on 18 June 2015

Brain phosphoproteome obtained by a FASP-based method reveals plasma membrane protein topology.

scientific article published on June 2010

C2 domain-containing phosphoprotein CDP138 regulates GLUT4 insertion into the plasma membrane.

scientific article

CCAT1 is an enhancer-templated RNA that predicts BET sensitivity in colorectal cancer

scientific article published on 11 January 2016

Cellular Interrogation: Exploiting Cell-to-Cell Variability to Discriminate Regulatory Mechanisms in Oscillatory Signalling.

scientific article published on July 2016

Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer

scientific article published on 2 September 2012

Comprehensive genomic analysis of malignant pleural mesothelioma identifies recurrent mutations, gene fusions and splicing alterations

scientific article published on 29 February 2016

Distinct resistance mechanisms arise to allosteric vs. ATP-competitive AKT inhibitors

scientific article published on 19 April 2022

Evolutionary constraints of phosphorylation in eukaryotes, prokaryotes, and mitochondria

scientific article

Extensive quantitative remodeling of the proteome between normal colon tissue and adenocarcinoma.

scientific article

Genome and transcriptome sequencing of lung cancers reveal diverse mutational and splicing events.

scientific article

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

scientific article

High-accuracy identification and bioinformatic analysis of in vivo protein phosphorylation sites in yeast

scientific article published in October 2009

Human Proteinpedia enables sharing of human protein data

scientific article

Integrated exome and transcriptome sequencing reveals ZAK isoform usage in gastric cancer

scientific article published on 8 May 2014

Integrative analysis of two cell lines derived from a non-small-lung cancer patient--a panomics approach

scientific article published on January 2014

Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle

scientific article published in August 2008

Large-scale proteomics analysis of the human kinome

scientific article published on 15 April 2009

Lysine acetylation targets protein complexes and co-regulates major cellular functions

scientific article (publication date: 14 August 2009)

MAPU 2.0: high-accuracy proteomes mapped to genomes

scientific article published on 23 October 2008

NRF2 activation promotes aggressive lung cancer and associates with poor clinical outcomes

scientific article published on 19 October 2020

PAK1 mediates pancreatic cancer cell migration and resistance to MET inhibition.

scientific article published on 6 October 2014

PHOSIDA 2011: the posttranslational modification database

scientific article

Phosphoproteins of the chicken eggshell calcified layer.

scientific article published in January 2007

Phosphoproteome analysis of E. coli reveals evolutionary conservation of bacterial Ser/Thr/Tyr phosphorylation

scientific article published on 15 October 2007

Phosphoproteome analysis of the MAPK pathway reveals previously undetected feedback mechanisms.

scientific article published on 08 June 2016

Phosphoproteome of Pristionchus pacificus provides insights into architecture of signaling networks in nematode models.

scientific article published on 25 August 2012

Precision mapping of an in vivo N-glycoproteome reveals rigid topological and sequence constraints.

scientific article published in May 2010

Profiling the Trypanosoma cruzi phosphoproteome.

scientific article

Quantitative phosphoproteome analysis of a mouse liver cell line reveals specificity of phosphatase inhibitors

scientific article published on November 2008

Quantitative phosphoproteomic analysis of the PI3K-regulated signaling network.

scientific article published on 10 June 2016

Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis

scientific article

Recurrent Loss of NFE2L2 Exon 2 Is a Mechanism for Nrf2 Pathway Activation in Human Cancers

scientific article published on 24 August 2016

Role of the E3 ubiquitin ligase RNF157 as a novel downstream effector linking PI3K and MAPK signaling pathways to the cell cycle

scientific article published on 27 June 2017

Sebida: a database for the functional and evolutionary analysis of genes with sex-biased expression.

scientific article published on 31 July 2006

Site-specific identification of SUMO-2 targets in cells reveals an inverted SUMOylation motif and a hydrophobic cluster SUMOylation motif

scientific article

Stable isotope labeling by amino acids in cell culture (SILAC) applied to quantitative proteomics of Bacillus subtilis

scientific article published in July 2010

Systems-wide analysis of K-Ras, Cdc42, and PAK4 signaling by quantitative phosphoproteomics.

scientific article published on 22 April 2013

Systems-wide analysis of a phosphatase knock-down by quantitative proteomics and phosphoproteomics

scientific article

The Ser/Thr/Tyr phosphoproteome of Lactococcus lactis IL1403 reveals multiply phosphorylated proteins

scientific article published in September 2008

The Serine/Threonine/Tyrosine Phosphoproteome of the Model BacteriumBacillus subtilis

article

USP7 small-molecule inhibitors interfere with ubiquitin binding

scientific article published on 18 October 2017

Uncovering a Dual Regulatory Role for Caspases During Endoplasmic Reticulum Stress-induced Cell Death.

scientific article

iProteinDB: An Integrative Database of Post-translational Modifications

scientific article published on 09 January 2019

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