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List of works by James E. Cloern

A cold phase of the East Pacific triggers new phytoplankton blooms in San Francisco Bay.

scholarly article

A comment on the use of flushing time, residence time, and age as transport time scales

article

A von Bertalanffy Growth Model with a Seasonally Varying Coefficient

An empirical model of the phytoplankton chlorophyll : carbon ratio-the conversion factor between productivity and growth rate

scientific article published in November 1995

Bioavailability of organic matter in a highly disturbed estuary: the role of detrital and algal resources

scientific article

Biological communities in San Francisco Bay track large-scale climate forcing over the North Pacific

article

Biomass and Productivity of Three Phytoplankton Size Classes in San Francisco Bay

scholarly article by Brian E. Cole et al published June 1986 in Estuaries and Coasts

Bivalve Grazing Can Shape Phytoplankton Communities

scholarly article by Lisa V. Lucas et al published 18 February 2016 in Frontiers in Marine Science

Blurred lines: Multiple freshwater and marine algal toxins at the land-sea interface of San Francisco Bay, California.

scientific article published on 10 March 2018

Chemistry and Microbiology of a Sewage Spill in South San Francisco Bay

Clams as CO2generators: ThePotamocorbula amurensisexample in San Francisco Bay

Climate anomalies generate an exceptional dinoflagellate bloom in San Francisco Bay

scholarly article

Comparative biogeochemistry–ecosystem–human interactions on dynamic continental margins

scholarly article by Lisa A. Levin published in January 2015

Complex seasonal patterns of primary producers at the land-sea interface

scientific article

Coupled effects of vertical mixing and benthic grazing on phytoplankton populations in shallow, turbid estuaries

scholarly article by Jeffrey R. Koseff et al published 1 November 1993 in Journal of Marine Research

Differences in in vivo fluorescence yield between three phytoplankton size classes

scholarly article by Andrea E. Alpine & James E. Cloern published 1985 in Journal of Plankton Research

Does the Sverdrup critical depth model explain bloom dynamics in estuaries?

article published in 1998

Drivers of change in estuarine-coastal ecosystems: Discoveries from four decades of study in San Francisco Bay

scholarly article by James E. Cloern published in October 2012

Ecological Values of Shallow-Water Habitats: Implications for the Restoration of Disturbed Ecosystems

article by Cary B. Lopez et al published April 2006 in Ecosystems

Empirical model of Skeletonema costatum photosynthetic rate, with applications in the San Francisco Bay estuary

article

Engaging the next generation of editorial talent through a hands‐on fellowship model

scientific article published in 2021

Estuarine fish communities respond to climate variability over both river and ocean basins

scientific article

Estuary-ocean connectivity: fast physics, slow biology.

scientific article

Global Patterns of Phytoplankton Dynamics in Coastal Ecosystems

scholarly article by Hans Paerl et al published 8 March 2011 in Eos

Habitat connectivity and ecosystem productivity: implications from a simple model

scientific article published on 4 December 2006

Human activities and climate variability drive fast-paced change across the world's estuarine-coastal ecosystems

scientific article

Machine learning identifies a strong association between warming and reduced primary productivity in an oligotrophic ocean gyre

scientific article published on 25 February 2020

Metal uptake by phytoplankton during a bloom in South San Francisco Bay: Implications for metal cycling in estuaries

scholarly article by Samuel N. Luoma et al published July 1998 in Limnology and Oceanography

Microbial and biogeochemical processes in Big Soda Lake, Nevada

article

Modeling of Estuarne Chlorophyll a from an Airborne Scanner

Molecular and isotopic tracers used to examine sources of organic matter and its incorporation into the food webs of San Francisco Bay

scientific article published in January 1995

Notes on a Mesodinium rubrum red tide in San Francisco Bay (California, USA)

Novel Analyses of Long-Term Data Provide a Scientific Basis for Chlorophyll-a Thresholds in San Francisco Bay

article

OCEANS: On Phytoplankton Trends

scientific article published in Science

On the human appropriation of wetland primary production

Organic matter sources and rehabilitation of the Sacramento-San Joaquin Delta (California, USA)

article

PHYTOPLANKTON SPATIAL DISTRIBUTION IN SOUTH SAN FRANCISCO BAY: MESOSCALE AND SMALL-SCALE VARIABILITY

scientific article published in 1986

Patterns and Scales of Phytoplankton Variability in Estuarine–Coastal Ecosystems

scholarly article by James E. Cloern & Alan D. Jassby published 25 July 2009 in Estuaries and Coasts

Perils of correlating CUSUM-transformed variables to infer ecological relationships (Breton et al. 2006; Glibert 2010)

article

Phytoplankton blooms in estuarine and coastal waters: Seasonal patterns and key species

article

Phytoplankton primary production in the world's estuarine-coastal ecosystems

article

Primary production and carrying capacity of former salt ponds after reconnection to San Francisco Bay

article published in 2008

Projected evolution of California's San Francisco Bay-Delta-river system in a century of climate change.

scientific article

Resolving variability of phytoplankton species composition and blooms in coastal ecosystems

article

River discharge controls phytoplankton dynamics in the northern San Francisco Bay estuary

scholarly article by James E. Cloern et al published April 1983 in Estuarine, Coastal and Shelf Science

Seasonal changes in the chemistry and biology of a meromictic lake (Big Soda Lake, Nevada, U.S.A.)

article

Seasonal changes in the spatial distribution of phytoplankton in small, temperate-zone lakes

article

Seasonal cycles of zooplankton from San Francisco Bay

scholarly article by Julie W. Ambler et al published October 1985 in Hydrobiologia

Seasonal variations in ectotherm growth rates: Quantifying growth as an intermittent non steady state compensatory process

scholarly article by Jean-Marc Guarini published in April 2011

Simulation model of Cryptomonas ovata population dynamics in southern Kootenay Lake, British Columbia

article

Simulation model of Skeletonema costatum population dynamics in northern San Francisco Bay, California

article

Spatial and temporal variability in South San Francisco Bay (USA). I. Horizontal distributions of salinity, suspended sediments, and phytoplankton biomass and productivity

scholarly article by Thomas M. Powell et al published June 1989 in Estuarine, Coastal and Shelf Science

Spatial and temporal variability in South San Francisco Bay (USA). II. Temporal changes in salinity, suspended sediments, and phytoplankton biomass and productivity over tidal time scales

scholarly article by James E. Cloern et al published June 1989 in Estuarine, Coastal and Shelf Science

Studies of the San Francisco Bay, California, estuarine ecosystem: Pilot regional monitoring program results, 1993

scientific article published in 1994

Temporal dynamics of estuarine phytoplankton: A case study of San Francisco Bay

article

The Design of Sampling Transects for Characterizing Water Quality in Estuaries

scientific article published in 1997

The U.S. Geological Survey Ecosystem Science Strategy, 2012-2022 - Advancing discovery and application through collaboration

scientific article published in 2012

The annual cycles of phytoplankton biomass

scientific article

The land-sea interface: A source of high-quality phytoplankton to support secondary production

scholarly article by Monika Winder published in September 2017

The phytoplankton component of seston in San Francisco Bay

scholarly article by S.M. Wienke & J.E. Cloern published March 1987 in Journal of Sea Research

The relative importance of light and nutrient limitation of phytoplankton growth: a simple index of coastal ecosystem sensitivity to nutrient enrichment

scientific article published in 1999

Time scales and mechanisms of estuarine variability, a synthesis from studies of San Francisco Bay

scholarly article by James E. Cloern & Frederic H. Nichols published October 1985 in Hydrobiologia

Trace metal associations in the water column of South San Francisco Bay, California

scholarly article by J.S. Kuwabara et al published March 1989 in Estuarine, Coastal and Shelf Science

Turbidity as a control on phytoplankton biomass and productivity in estuaries

scholarly article by James E. Cloern published November 1987 in Continental Shelf Research

U.S. Geological Survey Ecosystems science strategy: advancing discovery and application through collaboration

Water quality measurements in San Francisco Bay by the U.S. Geological Survey, 1969-2015.

scientific article published on 08 August 2017

Why large cells dominate estuarine phytoplankton

scholarly article by James E. Cloern published 30 November 2017 in Limnology and Oceanography

Year-to-Year Fluctuation of the Spring Phytoplankton Bloom in South San Francisco Bay: An Example of Ecological Variability at the Land-Sea Interface

scientific article published in 1995