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List of works by Agnes Hotz-Wagenblatt

ATF2 knockdown reinforces oxidative stress-induced apoptosis in TE7 cancer cells

scientific article published on 25 June 2013

Ago-RIP-Seq identifies Polycomb repressive complex I member CBX7 as a major target of miR-375 in prostate cancer progression

scientific article published on 20 July 2016

Automatic detection of exonic splicing enhancers (ESEs) using SVMs

scientific article

Bovine Foamy Virus: Shared and Unique Molecular Features In Vitro and In Vivo

scientific article published on 21 November 2019

CAFTAN: a tool for fast mapping, and quality assessment of cDNAs.

scientific article published on 25 October 2006

CD166/ALCAM mediates proinflammatory effects of S100B in delayed type hypersensitivity

scientific article published on 31 May 2013

Characteristics of transposable element exonization within human and mouse

scientific article

Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu's unique role in shaping the human transcriptome.

scientific article published on January 2007

Comparative proteome analysis of Milnesium tardigradum in early embryonic state versus adults in active and anhydrobiotic state

scientific article

Corrigendum: Genome-wide DNA-methylation landscape defines specialization of regulatory T cells in tissues

scientific article published in November 2017

ESTAnnotator: A tool for high throughput EST annotation

scientific article

Establishment and characterization of a highly tumourigenic and cancer stem cell enriched pancreatic cancer cell line as a well defined model system

scientific article

Expression and replication of virus-like circular DNA in human cells

scientific article published on 12 February 2018

Folate Repletion after Deficiency Induces Irreversible Genomic and Transcriptional Changes in Human Papillomavirus Type 16 (HPV16)-Immortalized Human Keratinocytes ⬇️

scientific article published on 04 March 2019

Functional Analyses of Bovine Foamy Virus-Encoded miRNAs Reveal the Importance of a Defined miRNA for Virus Replication and Host-Virus Interaction

scientific article published on 02 November 2020

Functional characterization of the bovine foamy virus miRNA expression cassette and its dumbbell-shaped pri-miRNA

Functions, structure, and read-through alternative splicing of feline APOBEC3 genes

scientific article published on 3 March 2008

Genome-Wide Analysis of the Circulating miRNome After Cerebral Ischemia Reveals a Reperfusion-Induced MicroRNA Cluster

scientific article

Genome-wide DNA-methylation landscape defines specialization of regulatory T cells in tissues.

scientific article published on 7 August 2017

Genome-wide prediction of splice-modifying SNPs in human genes using a new analysis pipeline called AASsites

scientific article

High-throughput SNP-based authentication of human cell lines

scientific article

Identification of a novel metastasis inducing lncRNA which suppresses the KAI1/CD82 metastasis suppressor gene and is upregulated in triple-negative breast cancer

scientific article

Identification of the feline foamy virus Bet domain essential for APOBEC3 counteraction

scientific article published on 24 July 2013

Identification, Biosynthesis, and Decapping of NAD-Capped RNAs in B. subtilis

scientific article published on 01 August 2018

Immunoprofiling of Chlamydia trachomatis using whole-proteome microarrays generated by on-chip in situ expression.

scientific article

In-depth mass spectrometric mapping of the human vitreous proteome

scientific article published on 20 May 2013

Induced and repressed genes after irradiation sensitizing by pentoxyphylline

scientific article published on March 2007

Insertion of retroviral vectors in NOD/SCID repopulating human peripheral blood progenitor cells occurs preferentially in the vicinity of transcription start regions and in introns

scientific article

Interdependent regulation of insulin receptor kinase activity by ADP and hydrogen peroxide

scientific article published on 23 November 2004

Investigating heat shock proteins of tardigrades in active versus anhydrobiotic state using shotgun proteomics

scientific article published in 2011

Isolation of multiple TT virus genotypes from spleen biopsy tissue from a Hodgkin's disease patient: genome reorganization and diversity in the hypervariable region

scientific article published on July 2004

Lentiviral vector integration sites in human NOD/SCID repopulating cells

scientific article published in October 2006

Mapping Active Gene-Regulatory Regions in Human Repopulating Long-Term HSCs

article

New miRNAs cloned from neuroblastoma

scientific article

Nuclear ARVCF protein binds splicing factors and contributes to the regulation of alternative splicing

scientific article published on 18 March 2014

Off-target effects of siRNA specific for GFP

scientific article

Proteomic analysis of tardigrades: towards a better understanding of molecular mechanisms by anhydrobiotic organisms

scientific article

Quantitative mass spectrometry analysis reveals a panel of nine proteins as diagnostic markers for colon adenocarcinomas.

scientific article

Redox-mediated functional and structural changes in insulin receptor kinase

scientific article published in January 2002

Replication-Competent Foamy Virus Vaccine Vectors as Novel Epitope Scaffolds for Immunotherapy

scientific article published on 23 September 2015

SERpredict: detection of tissue- or tumor-specific isoforms generated through exonization of transposable elements

scientific article

SIRT7 and the DEAD-box helicase DDX21 cooperate to resolve genomic R loops and safeguard genome stability

scientific article published on 8 August 2017

Skeletal muscle antagonizes antiviral CD8+ T cell exhaustion

scientific article published on 12 June 2020

Spatial localization of genes determined by intranuclear DNA fragmentation with the fusion proteins lamin KRED and histone KRED und visible light

scientific article published on 7 July 2013

SplicingCompass: differential splicing detection using RNA-seq data

scientific article

The long non-coding RNA Meg3 is dispensable for hematopoietic stem cells

scientific article published in Scientific Reports

The transcriptome of the colonial marine hydroid Hydractinia echinata

scientific article published on 3 December 2009

Translational profiling of B cells infected with the Epstein-Barr virus reveals 5' leader ribosome recruitment through upstream open reading frames.

scientific article published on 26 February 2018

miR-137 inhibits the invasion of melanoma cells through downregulation of multiple oncogenic target genes

scientific article

miR-339-3p Is a Tumor Suppressor in Melanoma.

scientific article

miRNA-1246 induces pro-inflammatory responses in mesenchymal stem/stromal cells by regulating PKA and PP2A.

scientific article

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