List of works - Minh Duc Cao

A biological compression model and its applications.

scientific article published in January 2011

A genome alignment algorithm based on compression.

scientific article

Assembly of whole-chromosome pseudomolecules for polyploid plant genomes using outbred mapping populations

scientific article published on 30 October 2020

Chiron: Translating nanopore raw signal directly into nucleotide sequence using deep learning

scientific article published on 10 April 2018

Complete Genome Sequence of Klebsiella quasipneumoniae subsp. similipneumoniae Strain ATCC 700603

scientific article (publication date: 26 May 2016)

Inferring short tandem repeat variation from paired-end short reads

scientific article published on 17 December 2013

Multifactorial Chromosomal Variants Regulate Polymyxin Resistance In Extensively Drug-Resistant Klebsiella pneumoniae

Octapeptin C4 Induces Less Resistance and Novel Mutations in an Epidemic Carbapenemase-producing Klebsiella pneumoniae ST258 Clinical Isolate Compared to Polymyxins

article by Miranda Pitt et al published 28 April 2018 in bioRxiv

Real-time resolution of short-read assembly graph using ONT long reads

scientific article published on 20 January 2021

Realtime analysis and visualization of MinION sequencing data with npReader.

scientific article

Repeat-encoded poly-Q tracts show statistical commonalities across species.

scientific article

Retooling phage display with electrohydrodynamic nanomixing and nanopore sequencing

scientific article published on 12 November 2019

Robust Estimation of Evolutionary Distances with Information Theory.

scientific article

Scaffolding and completing genome assemblies in real-time with nanopore sequencing

scientific article published on 20 February 2017

Sequencing technologies and tools for short tandem repeat variation detection.

scientific article published on 06 February 2014

Simulating The Dynamics Of Targeted Capture Sequencing With CapSim

article

Statistical Enrichment of Epigenetic States Around Triplet Repeats that Can Undergo Expansions

scientific article published on 8 March 2016

Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION sequencing

scholarly article published 15 May 2015

Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION(TM) sequencing

scientific article published on 26 July 2016

List of works by Minh Duc Cao

A biological compression model and its applications.

A genome alignment algorithm based on compression.

Assembly of whole-chromosome pseudomolecules for polyploid plant genomes using outbred mapping populations

Chiron: Translating nanopore raw signal directly into nucleotide sequence using deep learning

Complete Genome Sequence of Klebsiella quasipneumoniae subsp. similipneumoniae Strain ATCC 700603

Inferring short tandem repeat variation from paired-end short reads

Multifactorial Chromosomal Variants Regulate Polymyxin Resistance In Extensively Drug-Resistant Klebsiella pneumoniae

Octapeptin C4 Induces Less Resistance and Novel Mutations in an Epidemic Carbapenemase-producing Klebsiella pneumoniae ST258 Clinical Isolate Compared to Polymyxins

Real-time resolution of short-read assembly graph using ONT long reads

Realtime analysis and visualization of MinION sequencing data with npReader.

Repeat-encoded poly-Q tracts show statistical commonalities across species.

Retooling phage display with electrohydrodynamic nanomixing and nanopore sequencing

Robust Estimation of Evolutionary Distances with Information Theory.

Scaffolding and completing genome assemblies in real-time with nanopore sequencing

Sequencing technologies and tools for short tandem repeat variation detection.

Simulating The Dynamics Of Targeted Capture Sequencing With CapSim

Statistical Enrichment of Epigenetic States Around Triplet Repeats that Can Undergo Expansions

Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION sequencing

Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION(TM) sequencing

npInv: accurate detection and genotyping of inversions mediated by non-allelic homologous recombination using long read sub-alignment