List of works - Lucia Marucci

25th Annual Computational Neuroscience Meeting: CNS-2016

scientific article

A dual druggable genome-wide siRNA and compound library screening approach identifies modulators of parkin recruitment to mitochondria

scientific article published on 07 January 2020

A low-cost, open-source Turbidostat design for in-vivo control experiments in Synthetic Biology

scientific article published in 2019

A tunable dual-input system for on-demand dynamic gene expression regulation

scientific article published on 02 October 2019

A yeast synthetic network for in vivo assessment of reverse-engineering and modeling approaches

scientific article

An Orthogonal Multi-input Integration System to Control Gene Expression in Escherichia coli.

scientific article

An extended model for culture-dependent heterogenous gene expression and proliferation dynamics in mouse embryonic stem cells.

scientific article published on 03 August 2017

Author Correction: Designing minimal genomes using whole-cell models

scientific article published on 06 May 2020

BSim 2.0: An Advanced Agent-Based Cell Simulator.

scientific article published on 6 June 2017

Canonical Wnt Pathway Controls mESC Self-Renewal Through Inhibition of Spontaneous Differentiation via β-Catenin/TCF/LEF Functions

scientific article published on 09 August 2020

Computer-Aided Whole-Cell Design: Taking a Holistic Approach by Integrating Synthetic With Systems Biology

scientific article published on 07 August 2020

Construction and modelling of an inducible positive feedback loop stably integrated in a mammalian cell-line

scientific article

Correction: A dual druggable genome-wide siRNA and compound library screening approach identifies modulators of parkin recruitment to mitochondria

scientific article published on 01 April 2020

Culturing pluripotent stem cells: State of the art, challenges and future opportunities

Data hazards in synthetic biology

Derivation, identification and validation of a computational model of a novel synthetic regulatory network in yeast

scientific article published on 12 June 2010

Designing minimal genomes using whole-cell models

scientific article published on 11 February 2020

Genome-driven cell engineering review: in vivo and in silico metabolic and genome engineering

scientific article published on 03 July 2019

How to turn a genetic circuit into a synthetic tunable oscillator, or a bistable switch

scientific article

In vivo Feedback Control of an Antithetic Molecular-Titration Motif in Escherichia coli using Microfluidics

scientific article published on 23 September 2020

In-Silico Analysis and Implementation of a Multicellular Feedback Control Strategy in a Synthetic Bacterial Consortium.

scientific article

Mathematical Models of Organoid Cultures

scientific article published on 19 September 2019

Mathematical modeling reveals differential effects of erythropoietin on proliferation and lineage commitment of human hematopoietic progenitors in early erythroid culture.

scientific article published on 20 November 2015

Minimal Genome Design Algorithms Using Whole-Cell Models

scientific article published on 01 January 2021

Modeling Dynamics and Function of Bone Marrow Cells in Mouse Liver Regeneration

scientific article

Nanog Dynamics in Mouse Embryonic Stem Cells: Results from Systems Biology Approaches.

scientific article

Predicting Synthetic Gene Networks ⬇️

scientific article published on January 1, 2012

Regulation of Gene Expression and Signaling Pathway Activity in Mammalian Cells by Automated Microfluidics Feedback Control

article

Role of β-Catenin Activation Levels and Fluctuations in Controlling Cell Fate

article

Signal integration and decision making in Escherichia coli: A biological implementation of negative feedback control systems

scientific article published in 2016

Toward Engineering Biosystems With Emergent Collective Functions

scientific article published on 26 June 2020

Towards automated control of embryonic stem cell pluripotency

β-catenin fluctuates in mouse ESCs and is essential for Nanog-mediated reprogramming of somatic cells to pluripotency

scientific article published on 4 September 2014

List of works by Lucia Marucci

25th Annual Computational Neuroscience Meeting: CNS-2016

A dual druggable genome-wide siRNA and compound library screening approach identifies modulators of parkin recruitment to mitochondria

A low-cost, open-source Turbidostat design for in-vivo control experiments in Synthetic Biology

A tunable dual-input system for on-demand dynamic gene expression regulation

A yeast synthetic network for in vivo assessment of reverse-engineering and modeling approaches

An Orthogonal Multi-input Integration System to Control Gene Expression in Escherichia coli.

An extended model for culture-dependent heterogenous gene expression and proliferation dynamics in mouse embryonic stem cells.

Author Correction: Designing minimal genomes using whole-cell models

BSim 2.0: An Advanced Agent-Based Cell Simulator.

Canonical Wnt Pathway Controls mESC Self-Renewal Through Inhibition of Spontaneous Differentiation via β-Catenin/TCF/LEF Functions

Computer-Aided Whole-Cell Design: Taking a Holistic Approach by Integrating Synthetic With Systems Biology

Construction and modelling of an inducible positive feedback loop stably integrated in a mammalian cell-line

Correction: A dual druggable genome-wide siRNA and compound library screening approach identifies modulators of parkin recruitment to mitochondria

Culturing pluripotent stem cells: State of the art, challenges and future opportunities

Data hazards in synthetic biology

Derivation, identification and validation of a computational model of a novel synthetic regulatory network in yeast

Designing minimal genomes using whole-cell models

Genome-driven cell engineering review: in vivo and in silico metabolic and genome engineering

How to turn a genetic circuit into a synthetic tunable oscillator, or a bistable switch

In vivo Feedback Control of an Antithetic Molecular-Titration Motif in Escherichia coli using Microfluidics

In-Silico Analysis and Implementation of a Multicellular Feedback Control Strategy in a Synthetic Bacterial Consortium.

Mathematical Models of Organoid Cultures

Mathematical modeling reveals differential effects of erythropoietin on proliferation and lineage commitment of human hematopoietic progenitors in early erythroid culture.

Minimal Genome Design Algorithms Using Whole-Cell Models

Modeling Dynamics and Function of Bone Marrow Cells in Mouse Liver Regeneration

Nanog Dynamics in Mouse Embryonic Stem Cells: Results from Systems Biology Approaches.

Predicting Synthetic Gene Networks ⬇️

Regulation of Gene Expression and Signaling Pathway Activity in Mammalian Cells by Automated Microfluidics Feedback Control

Role of β-Catenin Activation Levels and Fluctuations in Controlling Cell Fate

Signal integration and decision making in Escherichia coli: A biological implementation of negative feedback control systems

Toward Engineering Biosystems With Emergent Collective Functions

Towards automated control of embryonic stem cell pluripotency

β-catenin fluctuates in mouse ESCs and is essential for Nanog-mediated reprogramming of somatic cells to pluripotency

β-catenin perturbations control differentiation programs in mouse embryonic stem cells