List of works - Pejman Mohammadi

24 hours in the life of HIV-1 in a T cell line

scientific article

Analysis of stop-gain and frameshift variants in human innate immunity genes

scientific article

Automated Design of Synthetic Cell Classifier Circuits Using a Two-Step Optimization Strategy

scientific article published on 6 February 2017

BMix: probabilistic modeling of occurring substitutions in PAR-CLIP data

scientific article

Bioinformatics and HIV latency

scientific article

Correction: 24 Hours in the Life of HIV-1 in a T Cell Line

scientific article published on 15 June 2015

Differential expression of lncRNAs during the HIV replication cycle: an underestimated layer in the HIV-host interplay

scientific article published on 26 October 2016

Dynamic models of viral replication and latency

scientific article

Dynamics of HIV latency and reactivation in a primary CD4+ T cell model

scientific article

Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations.

scientific article

Genetic regulatory variation in populations informs transcriptome analysis in rare disease

scientific article published on 10 October 2019

HIV-1 RNAs are Not Part of the Argonaute 2 Associated RNA Interference Pathway in Macrophages

scientific article published on 30 July 2015

IFI16 is required for DNA sensing in human macrophages by promoting production and function of cGAMP

scientific article

Modified penetrance of coding variants by cis-regulatory variation contributes to disease risk

scientific article published on 20 August 2018

Rare variant phasing and haplotypic expression from RNA sequencing with phASER

scientific article published on 08 September 2016

The Characteristics of Heterozygous Protein Truncating Variants in the Human Genome

scientific article published on 7 December 2015

The impact of sex on gene expression across human tissues

scientific article

TiMEx: a waiting time model for mutually exclusive cancer alterations

scientific article published on 9 July 2015

Tools and best practices for data processing in allelic expression analysis

scientific article published on 17 September 2015

Transcriptomic signatures across human tissues identify functional rare genetic variation

scientific article

List of works by Pejman Mohammadi

24 hours in the life of HIV-1 in a T cell line

Analysis of stop-gain and frameshift variants in human innate immunity genes

Automated Design of Synthetic Cell Classifier Circuits Using a Two-Step Optimization Strategy

BMix: probabilistic modeling of occurring substitutions in PAR-CLIP data

Bioinformatics and HIV latency

Correction: 24 Hours in the Life of HIV-1 in a T Cell Line

Differential expression of lncRNAs during the HIV replication cycle: an underestimated layer in the HIV-host interplay

Dynamic models of viral replication and latency

Dynamics of HIV latency and reactivation in a primary CD4+ T cell model

Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations.

Genetic regulatory variation in populations informs transcriptome analysis in rare disease

HIV-1 RNAs are Not Part of the Argonaute 2 Associated RNA Interference Pathway in Macrophages

IFI16 is required for DNA sensing in human macrophages by promoting production and function of cGAMP

Modified penetrance of coding variants by cis-regulatory variation contributes to disease risk

Rare variant phasing and haplotypic expression from RNA sequencing with phASER

The Characteristics of Heterozygous Protein Truncating Variants in the Human Genome

The impact of sex on gene expression across human tissues

TiMEx: a waiting time model for mutually exclusive cancer alterations

Tools and best practices for data processing in allelic expression analysis

Transcriptomic signatures across human tissues identify functional rare genetic variation