List of works - Adrien S.J. Melquiond

A unified conformational selection and induced fit approach to protein-peptide docking

scientific article

An overview of data-driven HADDOCK strategies in CAPRI rounds 38-45

scientific article published on 30 December 2019

Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment

scientific article published on 25 October 2019

Blind prediction of interfacial water positions in CAPRI

scientific article

Building macromolecular assemblies by information-driven docking: introducing the HADDOCK multibody docking server

scientific article published on 19 March 2010

Clustering biomolecular complexes by residue contacts similarity

scientific article published on 8 May 2012

Data-driven Docking: Using External Information to Spark the Biomolecular Rendez-vous

scientific article published in May 2010

Dynamic control of selectivity in the ubiquitination pathway revealed by an ASP to GLU substitution in an intra-molecular salt-bridge network

scientific article

Enhancers reside in a unique epigenetic environment during early zebrafish development

scientific article published on 5 July 2016

Following the aggregation of amyloid-forming peptides by computer simulations

Information-driven modeling of protein-peptide complexes

scientific article published in January 2015

Insight into cyanobacterial circadian timing from structural details of the KaiB-KaiC interaction.

scientific article published on 13 January 2014

Integrative Modeling of Biomolecular Complexes: HADDOCKing with Cryo-Electron Microscopy Data

scientific article

Molecular dynamics characterization of the conformational landscape of small peptides: A series of hands-on collaborative practical sessions for undergraduate students

scientific article published on 11 January 2016

Next challenges in protein-protein docking: from proteome to interactome and beyond

scientific article published on 28 September 2011

Performance of HADDOCK and a simple contact-based protein-ligand binding affinity predictor in the D3R Grand Challenge 2.

scientific article

Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment

scientific article

Probing amyloid fibril formation of the NFGAIL peptide by computer simulations

Protein-Protein Docking with HADDOCK

scientific article published on 21 March 2012

Robust detection of translocations in lymphoma FFPE samples using targeted locus capture-based sequencing

scientific article published on 07 June 2021

Role of the region 23-28 in Abeta fibril formation: insights from simulations of the monomers and dimers of Alzheimer's peptides Abeta40 and Abeta42.

scientific article published on June 2008

Sense and simplicity in HADDOCK scoring: Lessons from CASP-CAPRI round 1.

scientific article

Strengths and weaknesses of data-driven docking in critical assessment of prediction of interactions.

scientific article

Structures of soluble amyloid oligomers from computer simulations

scientific article

Supramolecular Structure of Membrane-Associated Polypeptides by Combining Solid-State NMR and Molecular Dynamics Simulations

scientific article

dMM-PBSA: A New HADDOCK Scoring Function for Protein-Peptide Docking

scientific article

List of works by Adrien S.J. Melquiond

A unified conformational selection and induced fit approach to protein-peptide docking

An overview of data-driven HADDOCK strategies in CAPRI rounds 38-45

Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment

Blind prediction of interfacial water positions in CAPRI

Building macromolecular assemblies by information-driven docking: introducing the HADDOCK multibody docking server

Clustering biomolecular complexes by residue contacts similarity

Data-driven Docking: Using External Information to Spark the Biomolecular Rendez-vous

Dynamic control of selectivity in the ubiquitination pathway revealed by an ASP to GLU substitution in an intra-molecular salt-bridge network

Enhancers reside in a unique epigenetic environment during early zebrafish development

Following the aggregation of amyloid-forming peptides by computer simulations

Information-driven modeling of protein-peptide complexes

Insight into cyanobacterial circadian timing from structural details of the KaiB-KaiC interaction.

Integrative Modeling of Biomolecular Complexes: HADDOCKing with Cryo-Electron Microscopy Data

Molecular dynamics characterization of the conformational landscape of small peptides: A series of hands-on collaborative practical sessions for undergraduate students

Next challenges in protein-protein docking: from proteome to interactome and beyond

Performance of HADDOCK and a simple contact-based protein-ligand binding affinity predictor in the D3R Grand Challenge 2.

Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment

Probing amyloid fibril formation of the NFGAIL peptide by computer simulations

Protein-Protein Docking with HADDOCK

Robust detection of translocations in lymphoma FFPE samples using targeted locus capture-based sequencing

Role of the region 23-28 in Abeta fibril formation: insights from simulations of the monomers and dimers of Alzheimer's peptides Abeta40 and Abeta42.

Sense and simplicity in HADDOCK scoring: Lessons from CASP-CAPRI round 1.

Strengths and weaknesses of data-driven docking in critical assessment of prediction of interactions.

Structures of soluble amyloid oligomers from computer simulations

Supramolecular Structure of Membrane-Associated Polypeptides by Combining Solid-State NMR and Molecular Dynamics Simulations

dMM-PBSA: A New HADDOCK Scoring Function for Protein-Peptide Docking