List of works - Taisei Kikuchi

A complete view of the genetic diversity of the Escherichia coli O-antigen biosynthesis gene cluster

scientific article

A family of glycosyl hydrolase family 45 cellulases from the pine wood nematode Bursaphelenchus xylophilus.

scientific article

A novel method to assess the biodiversity of parasites using 18S rDNA Illumina sequencing; parasitome analysis method

scientific article published on 16 January 2016

A possible origin population of pathogenic intestinal nematodes, Strongyloides stercoralis, unveiled by molecular phylogeny

scientific article

An expressed, endogenous Nodavirus-like element captured by a retrotransposon in the genome of the plant parasitic nematode Bursaphelenchus xylophilus

scientific article

Analysis of expressed sequence tags and identification of genes encoding cell-wall-degrading enzymes from the fungivorous nematode Aphelenchus avenae

scientific article

Analysis of expressed sequence tags from the wood-decaying fungus Fomitopsis palustris and identification of potential genes involved in the decay process.

scientific article

Assessment of helminth biodiversity in wild rats using 18S rDNA based metagenomics

scientific article

Assessment of the behaviour and survival of nematodes under low oxygen concentrations.

scientific article published on 14 May 2018

Biology and genome of a newly discovered sibling species of Caenorhabditis elegans

scientific article published in Nature Communications

Cloning and characterization of pectate lyases expressed in the esophageal gland of the pine wood nematode Bursaphelenchus xylophilus.

scientific article published in March 2006

Comparative and population genomic landscape of Phellinus noxius: A hypervariable fungus causing root rot in trees.

scientific article

Comparative genomics of Taphrina fungi causing varying degrees of tumorous deformity in plants

scientific article

Complete mitochondrial genomes of four entomopathogenic nematode species of the genus Steinernema.

scientific article published on 05 August 2016

Evaluation of magnetic cellulose bead-based DNA extraction from faecal materials for high-throughput bacterial community analyses

scholarly article by Tanzila Afrin et al published 28 February 2018 in Applied Entomology and Zoology

Evidence for an Opportunistic and Endophytic Lifestyle of the Bursaphelenchus xylophilus-Associated Bacteria Serratia marcescens PWN146 Isolated from Wilting Pinus pinaster

scientific article

Expressed sequence tag (EST) analysis of the pine wood nematode Bursaphelenchus xylophilus and B. mucronatus

scientific article

Fungicide activity through activation of a fungal signalling pathway.

scientific article published in September 2004

Genetic Differentiation and Spatial Structure of Phellinus noxius, the Causal Agent of Brown Root Rot of Woody Plants in Japan

scientific article published on 29 October 2015

Genome Evolution of Plant-Parasitic Nematodes

scientific article published on 07 June 2017

Genome of the fatal tapeworm Sparganum proliferum uncovers mechanisms for cryptic life cycle and aberrant larval proliferation

scientific article published on 31 May 2021

Genome-Wide Analyses of Individual Strongyloides stercoralis (Nematoda: Rhabditoidea) Provide Insights into Population Structure and Reproductive Life Cycles.

scientific article

Genome-wide variation in the pinewood nematode Bursaphelenchus xylophilus and its relationship with pathogenic traits.

scientific article published on 23 October 2015

Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus

scientific article

Gut bacterial and fungal communities in ground-dwelling beetles are associated with host food habit and habitat

scientific article published in 2018

Improved 18S and 28S rDNA primer sets for NGS-based parasite detection

scientific article published on 31 October 2019

Insights into the phylogeny of Northern Hemisphere Armillaria: Neighbor-net and Bayesian analyses of translation elongation factor 1-α gene sequences

scientific article

Integrated evidence reveals a new species in the ancient blue coral genus Heliopora (Octocorallia)

scientific article published in Scientific Reports

Karyotype and reproduction mode of the rodent parasite Strongyloides venezuelensis

scientific article

Longicorn beetle that vectors pinewood nematode carries many Wolbachia genes on an autosome.

scientific article published on 19 August 2009

Molecular and biochemical characterization of an endo-beta-1,3-glucanase from the pinewood nematode Bursaphelenchus xylophilus acquired by horizontal gene transfer from bacteria.

scientific article

Optimal ELISA antigen for the diagnosis of Ascaris suum infection in humans.

scientific article published on 8 September 2016

Possible stochastic sex determination in Bursaphelenchus nematodes

scientific article published on 11 May 2022

Secretome Analysis of the Pine Wood Nematode Bursaphelenchus xylophilus Reveals the Tangled Roots of Parasitism and Its Potential for Molecular Mimicry

scientific article

Signatures of adaptation to plant parasitism in nematode genomes

scientific article

Stage-specific transcriptome of Bursaphelenchus xylophilus reveals temporal regulation of effector genes and roles of the dauer-like stages in the lifecycle

article

Strongyloides ratti and S. venezuelensis - rodent models of Strongyloides infection

scientific article published on 03 March 2016

Study of intra-inter species protein-protein interactions for potential drug targets identification and subsequent drug design for Escherichia coli O104:H4 C277-11.

scientific article

The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode

scientific article

The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery

scientific article

The genome of Onchocerca volvulus, agent of river blindness

scientific article published on 21 November 2016

The genomic basis of parasitism in the Strongyloides clade of nematodes

scientific article published in February 2016

Top 10 plant-parasitic nematodes in molecular plant pathology.

scientific article published on July 2013

Transcriptional and morphological changes in the transition from mycetophagous to phytophagous phase in the plant-parasitic nematode Bursaphelenchus xylophilus

scientific article published on April 2015

Treatment of larva migrans syndrome with long-term administration of albendazole.

scientific article

Venestatin, a Ca++-binding protein from the parasitic nematode Strongyloides venezuelensis, is involved in the larval migration process.

scientific article published on 24 March 2017

Venison, another source of Paragonimus westermani infection.

scientific article published on 16 September 2016

List of works by Taisei Kikuchi

A complete view of the genetic diversity of the Escherichia coli O-antigen biosynthesis gene cluster

A family of glycosyl hydrolase family 45 cellulases from the pine wood nematode Bursaphelenchus xylophilus.

A novel method to assess the biodiversity of parasites using 18S rDNA Illumina sequencing; parasitome analysis method

A possible origin population of pathogenic intestinal nematodes, Strongyloides stercoralis, unveiled by molecular phylogeny

An expressed, endogenous Nodavirus-like element captured by a retrotransposon in the genome of the plant parasitic nematode Bursaphelenchus xylophilus

Analysis of expressed sequence tags and identification of genes encoding cell-wall-degrading enzymes from the fungivorous nematode Aphelenchus avenae

Analysis of expressed sequence tags from the wood-decaying fungus Fomitopsis palustris and identification of potential genes involved in the decay process.

Assessment of helminth biodiversity in wild rats using 18S rDNA based metagenomics

Assessment of the behaviour and survival of nematodes under low oxygen concentrations.

Biology and genome of a newly discovered sibling species of Caenorhabditis elegans

Cloning and characterization of pectate lyases expressed in the esophageal gland of the pine wood nematode Bursaphelenchus xylophilus.

Comparative and population genomic landscape of Phellinus noxius: A hypervariable fungus causing root rot in trees.

Comparative genomics of Taphrina fungi causing varying degrees of tumorous deformity in plants

Complete mitochondrial genomes of four entomopathogenic nematode species of the genus Steinernema.

Evaluation of magnetic cellulose bead-based DNA extraction from faecal materials for high-throughput bacterial community analyses

Evidence for an Opportunistic and Endophytic Lifestyle of the Bursaphelenchus xylophilus-Associated Bacteria Serratia marcescens PWN146 Isolated from Wilting Pinus pinaster

Expressed sequence tag (EST) analysis of the pine wood nematode Bursaphelenchus xylophilus and B. mucronatus

Fungicide activity through activation of a fungal signalling pathway.

Genetic Differentiation and Spatial Structure of Phellinus noxius, the Causal Agent of Brown Root Rot of Woody Plants in Japan

Genome Evolution of Plant-Parasitic Nematodes

Genome of the fatal tapeworm Sparganum proliferum uncovers mechanisms for cryptic life cycle and aberrant larval proliferation

Genome-Wide Analyses of Individual Strongyloides stercoralis (Nematoda: Rhabditoidea) Provide Insights into Population Structure and Reproductive Life Cycles.

Genome-wide variation in the pinewood nematode Bursaphelenchus xylophilus and its relationship with pathogenic traits.

Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus

Gut bacterial and fungal communities in ground-dwelling beetles are associated with host food habit and habitat

Improved 18S and 28S rDNA primer sets for NGS-based parasite detection

Insights into the phylogeny of Northern Hemisphere Armillaria: Neighbor-net and Bayesian analyses of translation elongation factor 1-α gene sequences

Integrated evidence reveals a new species in the ancient blue coral genus Heliopora (Octocorallia)

Karyotype and reproduction mode of the rodent parasite Strongyloides venezuelensis

Longicorn beetle that vectors pinewood nematode carries many Wolbachia genes on an autosome.

Molecular and biochemical characterization of an endo-beta-1,3-glucanase from the pinewood nematode Bursaphelenchus xylophilus acquired by horizontal gene transfer from bacteria.

Optimal ELISA antigen for the diagnosis of Ascaris suum infection in humans.

Possible stochastic sex determination in Bursaphelenchus nematodes

Secretome Analysis of the Pine Wood Nematode Bursaphelenchus xylophilus Reveals the Tangled Roots of Parasitism and Its Potential for Molecular Mimicry

Signatures of adaptation to plant parasitism in nematode genomes

Stage-specific transcriptome of Bursaphelenchus xylophilus reveals temporal regulation of effector genes and roles of the dauer-like stages in the lifecycle

Strongyloides ratti and S. venezuelensis - rodent models of Strongyloides infection

Study of intra-inter species protein-protein interactions for potential drug targets identification and subsequent drug design for Escherichia coli O104:H4 C277-11.

The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode

The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery

The genome of Onchocerca volvulus, agent of river blindness

The genomic basis of parasitism in the Strongyloides clade of nematodes

Top 10 plant-parasitic nematodes in molecular plant pathology.

Transcriptional and morphological changes in the transition from mycetophagous to phytophagous phase in the plant-parasitic nematode Bursaphelenchus xylophilus

Treatment of larva migrans syndrome with long-term administration of albendazole.

Venestatin, a Ca++-binding protein from the parasitic nematode Strongyloides venezuelensis, is involved in the larval migration process.

Venison, another source of Paragonimus westermani infection.