List of works - Francesco Asnicar

A Computing System for Discovering Causal Relationships Among Human Genes to Improve Drug Repositioning

scientific article published in 2021

Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

scientific article published on 01 December 2019

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 September 2019

Compact graphical representation of phylogenetic data and metadata with GraPhlAn

scientific article

Cross-cohort gut microbiome associations with immune checkpoint inhibitor response in advanced melanoma

scientific article published on 28 February 2022

Detecting contamination in viromes using ViromeQC

scientific article published on 01 December 2019

Effects of a personalized nutrition program on cardiometabolic health: a randomized controlled trial

scientific article published on 8 May 2024

Endogenous murine microbiota member Faecalibaculum rodentium and its human homologue protect from intestinal tumour growth

scientific article published on 27 January 2020

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

Gut vascular barrier impairment leads to intestinal bacteria dissemination and colorectal cancer metastasis to liver

Human postprandial responses to food and potential for precision nutrition

scientific article published on 11 June 2020

Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3

Menopause is associated with postprandial metabolism, metabolic health and lifestyle: The ZOE PREDICT study

scientific article published in November 2022

Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

scientific article published on 01 April 2019

Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals

Personalised REsponses to DIetary Composition Trial (PREDICT): an intervention study to determine inter-individual differences in postprandial response to foods

Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea

scientific article published on 02 December 2019

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.

scientific article published on 19 May 2020

Publisher Correction: Human postprandial responses to food and potential for precision nutrition

scientific article published on 20 October 2020

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 August 2019

Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling

scientific article published on 17 January 2017

Uncovering oral Neisseria tropism and persistence using metagenomic sequencing

scientific article

Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis

scientific article

List of works by Francesco Asnicar

A Computing System for Discovering Causal Relationships Among Human Genes to Improve Drug Repositioning

Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Compact graphical representation of phylogenetic data and metadata with GraPhlAn

Cross-cohort gut microbiome associations with immune checkpoint inhibitor response in advanced melanoma

Detecting contamination in viromes using ViromeQC

Effects of a personalized nutrition program on cardiometabolic health: a randomized controlled trial

Endogenous murine microbiota member Faecalibaculum rodentium and its human homologue protect from intestinal tumour growth

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

Gut vascular barrier impairment leads to intestinal bacteria dissemination and colorectal cancer metastasis to liver

Human postprandial responses to food and potential for precision nutrition

Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3

Menopause is associated with postprandial metabolism, metabolic health and lifestyle: The ZOE PREDICT study

Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals

Personalised REsponses to DIetary Composition Trial (PREDICT): an intervention study to determine inter-individual differences in postprandial response to foods

Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.

Publisher Correction: Human postprandial responses to food and potential for precision nutrition

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling

Uncovering oral Neisseria tropism and persistence using metagenomic sequencing

Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis