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List of works by Kevin P Byrne

A pipeline for automated annotation of yeast genome sequences by a conserved-synteny approach

scientific article

Additions, losses, and rearrangements on the evolutionary route from a reconstructed ancestor to the modern Saccharomyces cerevisiae genome

scientific article published in May 2009

Analysis of gene evolution and metabolic pathways using the Candida Gene Order Browser

scientific article

Centromeres of the Yeast Komagataella phaffii (Pichia pastoris) Have a Simple Inverted-Repeat Structure

scientific article published on 6 August 2016

Clade- and species-specific features of genome evolution in the Saccharomycetaceae

scientific article

Comparative genome analysis and gene finding in Candida species using CGOB.

scientific article published on 13 March 2013

Consistent patterns of rate asymmetry and gene loss indicate widespread neofunctionalization of yeast genes after whole-genome duplication

scientific article published on 28 December 2006

Coverage-Versus-Length Plots, a Simple Quality Control Step for Yeast Genome Sequence Assemblies

scientific article published on 07 March 2019

Draft Genome Sequence of the Yeast Nadsonia starkeyi-henricii UCD142, Isolated from Forest Soil in Ireland.

scientific article

Evolutionary Mobility of the Ribosomal DNA Array in Yeasts ⬇️

scientific article published on January 1, 2013

Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents

scientific article

Evolutionary restoration of fertility in an interspecies hybrid yeast, by whole-genome duplication after a failed mating-type switch.

scientific article

Flip/flop mating-type switching in the methylotrophic yeast Ogataea polymorpha is regulated by an Efg1-Rme1-Ste12 pathway

scientific article

Independent sorting-out of thousands of duplicated gene pairs in two yeast species descended from a whole-genome duplication

scientific article

Mating-type switching by chromosomal inversion in methylotrophic yeasts suggests an origin for the three-locus Saccharomyces cerevisiae system

scientific article

Mechanisms of Chromosome Number Evolution in Yeast ⬇️

scientific article published on July 21, 2011

Multiple rounds of speciation associated with reciprocal gene loss in polyploid yeasts

scientific article

Population genomics shows no distinction between pathogenic Candida krusei and environmental Pichia kudriavzevii: One species, four names

scientific article published on 19 July 2018

Rate asymmetry after genome duplication causes substantial long-branch attraction artifacts in the phylogeny of Saccharomyces species

scientific article published on 5 October 2005

SearchDOGS bacteria, software that provides automated identification of potentially missed genes in annotated bacterial genomes

scientific article

Systematic discovery of unannotated genes in 11 yeast species using a database of orthologous genomic segments

scientific article

Transcriptional response to lactic acid stress in the hybrid yeast Zygosaccharomyces parabailii.

scientific article published on 21 December 2017

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