List of works - Samantha Riccadonna

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

scientific article

The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance

scientific article

Clinical value of prognosis gene expression signatures in colorectal cancer: a systematic review.

scientific article

A comparison of MCC and CEN error measures in multi-class prediction

scientific article (publication date: 2012)

minerva and minepy: a C engine for the MINE suite and its R, Python and MATLAB wrappers

scientific article published on December 14, 2012

Machine learning methods for predictive proteomics

scientific article published on 29 February 2008

Identification of Biomarkers for Defense Response to Plasmopara viticola in a Resistant Grape Variety

scientific article published on 5 September 2017

Stability Indicators in Network Reconstruction

scientific article published on February 27, 2014

Algebraic Comparison of Partial Lists in Bioinformatics

scientific article published on May 17, 2012

Transcriptome and Cell Physiological Analyses in Different Rice Cultivars Provide New Insights Into Adaptive and Salinity Stress Responses.

scientific article published on 5 March 2018

The HIM glocal metric and kernel for network comparison and classification

article

Systems biology of host-mycobiota interactions: dissecting Dectin-1 and Dectin-2 signalling in immune cells with DC-ATLAS.

scientific article published on 13 July 2013

DTW-MIC Coexpression Networks from Time-Course Data

scientific article

Pathway Inspector: a pathway based web application for RNAseq analysis of model and non-model organisms.

scientific article

A practical tool for maximal information coefficient analysis

scientific article published on 2 April 2018

A Machine Learning Pipeline for Discriminant Pathways Identification

scholarly article by Annalisa Barla et al published 2012 in Lecture Notes in Computer Science

ReNette: a web-infrastructure for reproducible network analysis

A Machine Learning Pipeline for Identification of Discriminant Pathways

scholarly article published 2014

An interactive real-time visualization environment for patients with heart failure.

scientific article published on January 2005

Discovery of A-type procyanidin dimers in yellow raspberries by untargeted metabolomics and correlation based data analysis

scientific article

List of works by Samantha Riccadonna

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance

Clinical value of prognosis gene expression signatures in colorectal cancer: a systematic review.

A comparison of MCC and CEN error measures in multi-class prediction

minerva and minepy: a C engine for the MINE suite and its R, Python and MATLAB wrappers

Machine learning methods for predictive proteomics

Identification of Biomarkers for Defense Response to Plasmopara viticola in a Resistant Grape Variety

Stability Indicators in Network Reconstruction

Algebraic Comparison of Partial Lists in Bioinformatics

Transcriptome and Cell Physiological Analyses in Different Rice Cultivars Provide New Insights Into Adaptive and Salinity Stress Responses.

The HIM glocal metric and kernel for network comparison and classification

Systems biology of host-mycobiota interactions: dissecting Dectin-1 and Dectin-2 signalling in immune cells with DC-ATLAS.

DTW-MIC Coexpression Networks from Time-Course Data

Pathway Inspector: a pathway based web application for RNAseq analysis of model and non-model organisms.

A practical tool for maximal information coefficient analysis

A Machine Learning Pipeline for Discriminant Pathways Identification

ReNette: a web-infrastructure for reproducible network analysis

A Machine Learning Pipeline for Identification of Discriminant Pathways

An interactive real-time visualization environment for patients with heart failure.

Discovery of A-type procyanidin dimers in yellow raspberries by untargeted metabolomics and correlation based data analysis

Parenting dimensions in mothers and fathers of children with Autism Spectrum Disorders