List of works - Jean-Christophe Andrau

A threshold level of NFATc1 activity facilitates thymocyte differentiation and opposes notch-driven leukaemia development

scientific article published on 17 June 2016

ARS2 is a general suppressor of pervasive transcription

scientific article published on September 2017

Abnormal rearrangements associated with V(D)J recombination in Fanconi anemia.

scientific article published on September 1998

An update on recent methods applied for deciphering the diversity of the noncoding RNA genome structure and function

scientific article published on 15 April 2013

Architecture and expression of the nfatc1 gene in lymphocytes

scientific article

Argonaute proteins couple chromatin silencing to alternative splicing.

scientific article published on 9 September 2012

B″-associated factor(s) involved in RNA polymerase III preinitiation complex formation and start-site selection

scientific article published on 01 October 2001

CoCAS: a ChIP-on-chip analysis suite

scientific article published on 04 February 2009

CpG islands and GC content dictate nucleosome depletion in a transcription-independent manner at mammalian promoters

scientific article

Divergent transcription is associated with promoters of transcriptional regulators

scientific article

Dynamic recruitment of Ets1 to both nucleosome-occupied and -depleted enhancer regions mediates a transcriptional program switch during early T-cell differentiation.

scientific article

Editorial for “Diversity of the non-coding transcriptomes revealed by RNA-seq technologies”

scientific article published on 01 September 2013

Genome-wide RNA polymerase II: not genes only!

scientific article published on 06 May 2008

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit

scientific article published in April 2005

Genome-wide location of the coactivator mediator: Binding without activation and transient Cdk8 interaction on DNA.

scientific article published on April 2006

H3K4 tri-methylation provides an epigenetic signature of active enhancers

scientific article

High-throughput and quantitative assessment of enhancer activity in mammals by CapStarr-seq.

scientific article

Initiating RNA polymerase II and TIPs as hallmarks of enhancer activity and tissue-specificity

scientific article published on November 2011

Lineage-specific enhancers activate self-renewal genes in macrophages and embryonic stem cells

scientific article

Mot1p is essential for TBP recruitment to selected promoters during in vivo gene activation

scientific article

Mutagenesis of yeast TFIIIB70 reveals C-terminal residues critical for interaction with TBP and C34 1 1Edited by M. Yaniv

scientific article published on 01 May 1999

Noncoding Transcription at Enhancers: General Principles and Functional Models ⬇️

scientific article published on August 16, 2012

Pasha: a versatile R package for piling chromatin HTS data

scientific article

Site- and allele-specific polycomb dysregulation in T-cell leukaemia

scientific article

Site-specific methylation and acetylation of lysine residues in the C-terminal domain (CTD) of RNA polymerase II

scientific article published on 13 November 2015

Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 Lys36.

scientific article

The Ccr4-NOT deadenylase subunits CNOT7 and CNOT8 have overlapping roles and modulate cell proliferation

scientific article

The chromatin environment shapes DNA replication origin organization and defines origin classes

scientific article published on 11 November 2015

Threonine-4 of mammalian RNA polymerase II CTD is targeted by Polo-like kinase 3 and required for transcriptional elongation

scientific article (publication date: 13 June 2012)

Transcription initiation platforms and GTF recruitment at tissue-specific enhancers and promoters.

scientific article

Transcription-dependent generation of a specialized chromatin structure at the TCRβ locus.

scientific article

Two possible modes of pioneering associated with combinations of H2A.Z and p300/CBP at nucleosome-occupied enhancers

scientific article

Tyrosine phosphorylation of RNA polymerase II CTD is associated with antisense promoter transcription and active enhancers in mammalian cells

scientific article

Tyrosine-1 of RNA Polymerase II CTD Controls Global Termination of Gene Transcription in Mammals

scientific article published in January 2018

List of works by Jean-Christophe Andrau

A threshold level of NFATc1 activity facilitates thymocyte differentiation and opposes notch-driven leukaemia development

ARS2 is a general suppressor of pervasive transcription

Abnormal rearrangements associated with V(D)J recombination in Fanconi anemia.

An update on recent methods applied for deciphering the diversity of the noncoding RNA genome structure and function

Architecture and expression of the nfatc1 gene in lymphocytes

Argonaute proteins couple chromatin silencing to alternative splicing.

B″-associated factor(s) involved in RNA polymerase III preinitiation complex formation and start-site selection

CoCAS: a ChIP-on-chip analysis suite

CpG islands and GC content dictate nucleosome depletion in a transcription-independent manner at mammalian promoters

Divergent transcription is associated with promoters of transcriptional regulators

Dynamic recruitment of Ets1 to both nucleosome-occupied and -depleted enhancer regions mediates a transcriptional program switch during early T-cell differentiation.

Editorial for “Diversity of the non-coding transcriptomes revealed by RNA-seq technologies”

Genome-wide RNA polymerase II: not genes only!

Genome-wide analyses reveal RNA polymerase II located upstream of genes poised for rapid response upon S. cerevisiae stationary phase exit

Genome-wide location of the coactivator mediator: Binding without activation and transient Cdk8 interaction on DNA.

H3K4 tri-methylation provides an epigenetic signature of active enhancers

High-throughput and quantitative assessment of enhancer activity in mammals by CapStarr-seq.

Initiating RNA polymerase II and TIPs as hallmarks of enhancer activity and tissue-specificity

Lineage-specific enhancers activate self-renewal genes in macrophages and embryonic stem cells

Mot1p is essential for TBP recruitment to selected promoters during in vivo gene activation

Mutagenesis of yeast TFIIIB70 reveals C-terminal residues critical for interaction with TBP and C34 1 1Edited by M. Yaniv

Noncoding Transcription at Enhancers: General Principles and Functional Models ⬇️

Pasha: a versatile R package for piling chromatin HTS data

Site- and allele-specific polycomb dysregulation in T-cell leukaemia

Site-specific methylation and acetylation of lysine residues in the C-terminal domain (CTD) of RNA polymerase II

Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 Lys36.

The Ccr4-NOT deadenylase subunits CNOT7 and CNOT8 have overlapping roles and modulate cell proliferation

The chromatin environment shapes DNA replication origin organization and defines origin classes

Threonine-4 of mammalian RNA polymerase II CTD is targeted by Polo-like kinase 3 and required for transcriptional elongation

Transcription initiation platforms and GTF recruitment at tissue-specific enhancers and promoters.

Transcription-dependent generation of a specialized chromatin structure at the TCRβ locus.

Two possible modes of pioneering associated with combinations of H2A.Z and p300/CBP at nucleosome-occupied enhancers

Tyrosine phosphorylation of RNA polymerase II CTD is associated with antisense promoter transcription and active enhancers in mammalian cells

Tyrosine-1 of RNA Polymerase II CTD Controls Global Termination of Gene Transcription in Mammals