List of works - Moreno Zolfo

Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

scientific article published on 01 December 2019

Correction for Pinto et al., "Draft Genome Sequences of Novel Pseudomonas, Flavobacterium, and Sediminibacterium Strains from a Freshwater Ecosystem".

scientific article published on 8 March 2018

Detecting contamination in viromes using ViromeQC

scientific article published on 01 December 2019

Draft Genome Sequence of the Planktic Cyanobacterium Tychonema bourrellyi, Isolated from Alpine Lentic Freshwater

scientific article published on 22 November 2017

Draft Genome Sequences of Novel Pseudomonas, Flavobacterium, and Sediminibacterium Species Strains from a Freshwater Ecosystem

scientific article published in February 2018

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle

scientific article published on 17 January 2019

Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3

Maternal inheritance of bifidobacterial communities and bifidophages in infants through vertical transmission

scientific article

MetaMLST: multi-locus strain-level bacterial typing from metagenomic samples

scientific article

Metagenomic Sequencing with Strain-Level Resolution Implicates Uropathogenic E. coli in Necrotizing Enterocolitis and Mortality in Preterm Infants

scientific article

Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

scientific article published on 01 April 2019

Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel species

scientific article published on 28 December 2019

Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome

article

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.

scientific article published on 19 May 2020

Profiling microbial strains in urban environments using metagenomic sequencing data.

scientific article published on 9 May 2018

Strain-level microbial epidemiology and population genomics from shotgun metagenomics

scientific article

Strong oral plaque microbiome signatures for dental implant diseases identified by strain-resolution metagenomics

scientific article published on 30 October 2020

Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling

scientific article published on 17 January 2017

The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations

scientific article published on 10 October 2019

Uncovering oral Neisseria tropism and persistence using metagenomic sequencing

scientific article

Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis

scientific article

List of works by Moreno Zolfo

Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Correction for Pinto et al., "Draft Genome Sequences of Novel Pseudomonas, Flavobacterium, and Sediminibacterium Strains from a Freshwater Ecosystem".

Detecting contamination in viromes using ViromeQC

Draft Genome Sequence of the Planktic Cyanobacterium Tychonema bourrellyi, Isolated from Alpine Lentic Freshwater

Draft Genome Sequences of Novel Pseudomonas, Flavobacterium, and Sediminibacterium Species Strains from a Freshwater Ecosystem

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle

Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3

Maternal inheritance of bifidobacterial communities and bifidophages in infants through vertical transmission

MetaMLST: multi-locus strain-level bacterial typing from metagenomic samples

Metagenomic Sequencing with Strain-Level Resolution Implicates Uropathogenic E. coli in Necrotizing Enterocolitis and Mortality in Preterm Infants

Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel species

Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.

Profiling microbial strains in urban environments using metagenomic sequencing data.

Strain-level microbial epidemiology and population genomics from shotgun metagenomics

Strong oral plaque microbiome signatures for dental implant diseases identified by strain-resolution metagenomics

Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling

The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations

Uncovering oral Neisseria tropism and persistence using metagenomic sequencing

Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis