List of works - Olivier Bernard

A new framework for metabolic modeling under non-balanced growth. Application to carbon metabolism of unicellular microalgae

scientific article published in 2013

A state of the art of metabolic networks of unicellular microalgae and cyanobacteria for biofuel production.

scientific article published on 25 April 2015

A thermal trade-off between viral production and degradation drives phytoplankton-virus population dynamics

scientific article published on 18 August 2020

A virtual imaging platform for multi-modality medical image simulation

scientific article published on January 2013

Adaptive control for optimizing microalgae production

scientific article published in 2013

Adaptive control of light attenuation for optimizing microalgae production

scientific article published in June 2015

B-Spline Explicit Active Surfaces: An Efficient Framework for Real-Time 3-D Region-Based Segmentation ⬇️

scientific article published on January 1, 2012

Competition between phytoplankton and bacteria: exclusion and coexistence

scientific article published on 20 April 2014

Coupling and uncoupling of triglyceride and beta-carotene production by Dunaliella salina under nitrogen limitation and starvation

scientific article published on 31 January 2017

DRUM: a new framework for metabolic modeling under non-balanced growth. Application to the carbon metabolism of unicellular microalgae

scientific article

Design of Optimal Experiments for Parameter Estimation of Microalgae Growth Models

scientific article published in 2013

Driving Species Competition in a Light-limited Chemostat

scientific article published in 2013

Dynamic coupling of photoacclimation and photoinhibition in a model of microalgae growth

scientific article published on 20 November 2015

Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes

scientific article

Getting the most out of it: Optimal experiments for parameter estimation of microalgae growth models

scientific article published in June 2014

How do microalgae perceive light in a high-rate pond? Towards more realistic Lagrangian experiments.

scientific article published on 30 May 2018

Long-term adaptive response to high-frequency light signals in the unicellular photosynthetic eukaryote Dunaliella salina

scientific article published on 18 April 2015

Mathematical modeling of unicellular microalgae and cyanobacteria metabolism for biofuel production.

scientific article published on 29 March 2015

Modeling the impact of high temperatures on microalgal viability and photosynthetic activity.

scientific article published on 26 May 2017

Modelling of Microalgae Culture Systems with Applications to Control and Optimization

scientific article

Optimizing microalgal production in raceway systems.

scientific article published on 7 March 2013

Phytoplankton growth formulation in marine ecosystem models: Should we take into account photo-acclimation and variable stoichiometry in oligotrophic areas?

scholarly article by S.-D. Ayata published in September 2013

Phytoplankton plasticity drives large variability in carbon fixation efficiency

scholarly article by Sakina-Dorothée Ayata et al published 23 December 2014 in Geophysical Research Letters

Reducing the Anaerobic Digestion Model No. 1 for its application to an industrial wastewater treatment plant treating winery effluent wastewater ⬇️

scientific article published on January 3, 2013

Reply to the Comment on "Mathematical modeling of unicellular microalgae and cyanobacteria metabolism for biofuel production" by Baroukh et al. [Curr. Opin. Biotechnol. 2015, 33:198-205].

scientific article published on 21 March 2016

Temperature is a key factor in Micromonas-virus interactions.

scientific article published on 13 January 2017

The architecture and metabolic traits of monospecific photosynthetic biofilms studied in a custom flow‐through system

scientific article published in 2022

Twelve quick tips for designing sound dynamical models for bioprocesses

scientific article published on 22 August 2019

Understanding photosynthetic biofilm productivity and structure through 2D simulation

scientific article published on 04 April 2022

Validation of a simple model accounting for light and temperature effect on microalgal growth ⬇️

scientific article published on July 16, 2012

List of works by Olivier Bernard

A new framework for metabolic modeling under non-balanced growth. Application to carbon metabolism of unicellular microalgae

A state of the art of metabolic networks of unicellular microalgae and cyanobacteria for biofuel production.

A thermal trade-off between viral production and degradation drives phytoplankton-virus population dynamics

A virtual imaging platform for multi-modality medical image simulation

Adaptive control for optimizing microalgae production

Adaptive control of light attenuation for optimizing microalgae production

B-Spline Explicit Active Surfaces: An Efficient Framework for Real-Time 3-D Region-Based Segmentation ⬇️

Competition between phytoplankton and bacteria: exclusion and coexistence

Coupling and uncoupling of triglyceride and beta-carotene production by Dunaliella salina under nitrogen limitation and starvation

DRUM: a new framework for metabolic modeling under non-balanced growth. Application to the carbon metabolism of unicellular microalgae

Design of Optimal Experiments for Parameter Estimation of Microalgae Growth Models

Driving Species Competition in a Light-limited Chemostat

Dynamic coupling of photoacclimation and photoinhibition in a model of microalgae growth

Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes

Getting the most out of it: Optimal experiments for parameter estimation of microalgae growth models

How do microalgae perceive light in a high-rate pond? Towards more realistic Lagrangian experiments.

Long-term adaptive response to high-frequency light signals in the unicellular photosynthetic eukaryote Dunaliella salina

Mathematical modeling of unicellular microalgae and cyanobacteria metabolism for biofuel production.

Modeling the impact of high temperatures on microalgal viability and photosynthetic activity.

Modelling of Microalgae Culture Systems with Applications to Control and Optimization

Optimizing microalgal production in raceway systems.

Phytoplankton growth formulation in marine ecosystem models: Should we take into account photo-acclimation and variable stoichiometry in oligotrophic areas?

Phytoplankton plasticity drives large variability in carbon fixation efficiency

Reducing the Anaerobic Digestion Model No. 1 for its application to an industrial wastewater treatment plant treating winery effluent wastewater ⬇️

Reply to the Comment on "Mathematical modeling of unicellular microalgae and cyanobacteria metabolism for biofuel production" by Baroukh et al. [Curr. Opin. Biotechnol. 2015, 33:198-205].

Temperature is a key factor in Micromonas-virus interactions.

The architecture and metabolic traits of monospecific photosynthetic biofilms studied in a custom flow‐through system

Twelve quick tips for designing sound dynamical models for bioprocesses

Understanding photosynthetic biofilm productivity and structure through 2D simulation

Validation of a simple model accounting for light and temperature effect on microalgal growth ⬇️