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List of works by Szymon Grabowski

Comment on: 'ERGC: an efficient referential genome compression algorithm'.

scientific article published on 28 November 2015

Compression of DNA sequence reads in FASTQ format.

scientific article published on 19 January 2011

Correction: Indexes of Large Genome Collections on a PC.

scientific article published on 8 May 2015

Data compression for sequencing data

scientific article

Disk-based compression of data from genome sequencing

scientific article

Disk-based k-mer counting on a PC.

scientific article

Fast matching of transcription factor motifs using generalized position weight matrix models

scientific article published on 6 August 2013

Genome compression: a novel approach for large collections.

scientific article published on 21 August 2013

Google Books Ngrams Recompressed and Searchable

scientific article published in 2012

Indexes of large genome collections on a PC. ⬇️

scientific article

Indexing Arbitrary-Length k-Mers in Sequencing Reads. ⬇️

scientific article published on 16 July 2015

KMC 2: fast and resource-frugal k-mer counting ⬇️

scientific article

Lightweight Fingerprints for Fast Approximate Keyword Matching Using Bitwise Operations

scholarly article

MBGC: Multiple Bacteria Genome Compressor

scientific article published in 2022

Motif matching using gapped patterns

PgRC: pseudogenome-based read compressor

scientific article published on 01 April 2020

Robust relative compression of genomes with random access ⬇️

scientific article published on September 5, 2011

SOPanG: online text searching over a pan-genome

scientific article published on 01 December 2018

Suffix Arrays with a Twist

scholarly article

Whisper: Read sorting allows robust mapping of DNA sequencing data

scientific article published on 01 June 2019

copMEM: finding maximal exact matches via sampling both genomes

scientific article published on 01 February 2019

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