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List of works by Vladimir B. Teif

A lattice model for transcription factor access to nucleosomal DNA.

scientific article published on October 2010

Affinity, stoichiometry and cooperativity of heterochromatin protein 1 (HP1) binding to nucleosomal arrays

scientific article

CTCF-dependent chromatin boundaries formed by asymmetric nucleosome arrays with decreased linker length

scientific article published on 01 December 2019

Calculating transcription factor binding maps for chromatin.

scientific article

Condensed DNA: condensing the concepts.

scientific article

DNA (de)methylation in embryonic stem cells controls CTCF-dependent chromatin boundaries

scientific article published on 04 April 2019

Electrostatic effect of H1-histone protein binding on nucleosome repeat length.

scientific article published on 31 July 2014

Genome-wide nucleosome positioning during embryonic stem cell development

scientific article

Ligand-induced DNA condensation: choosing the model.

scientific article

Linker histone epitopes are hidden by in situ higher-order chromatin structure

scientific article published on 06 June 2020

Linking aberrant chromatin features in chronic lymphocytic leukemia to transcription factor networks

scientific article published on 22 May 2019

Long-Range Interactions between Ligands Bound to a DNA Molecule Give Rise to Adsorption with the Character of Phase Transition of the First Kind

scientific article published on 01 April 2000

Matrix formalism for site-specific binding of unstructured proteins to multicomponent lipid membranes

scientific article published on 01 April 2008

Modeling of DNA condensation and decondensation caused by ligand binding.

scientific article published in October 2002

NucTools: analysis of chromatin feature occupancy profiles from high-throughput sequencing data

scientific article

Nucleosome mediated crosstalk between transcription factors at eukaryotic enhancers.

scientific article published on 10 June 2011

Nucleosome positioning: resources and tools online

scientific article

Nucleosome repositioning during differentiation of a human myeloid leukemia cell line

scientific article

Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem cell development.

scientific article

Nucleosomes in gene regulation: theoretical approaches

scientific article published on January 1, 2012

Regulation of the nucleosome repeat length in vivo by the DNA sequence, protein concentrations and long-range interactions

scientific article

Statistical–mechanical lattice models for protein–DNA binding in chromatin ⬇️

scientific article published on September 30, 2010

Strong nucleosomes of mouse genome including recovered centromeric sequences

scientific article published on 28 July 2014

Structure-driven homology pairing of chromatin fibers: the role of electrostatics and protein-induced bridging.

scientific article published on 17 January 2013

Taking into account nucleosomes for predicting gene expression ⬇️

scientific article published on March 21, 2013

Whole-genome fingerprint of the DNA methylome during chemically induced differentiation of the human AML cell line HL-60/S4

scientific article published on 17 February 2020

[Calculation of DNA condensation, caused by adsorption of ligands]

scientific article published on 01 January 2001

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