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List of works by Marcey Waters

A Synthetic Receptor for Asymmetric Dimethyl Arginine ⬇️

scientific article published on April 22, 2013

A catalyst selection protocol that identifies biomimetic motifs from β-hairpin libraries.

scientific article

A comparative analysis of the ubiquitination kinetics of multiple degrons to identify an ideal targeting sequence for a proteasome reporter

scientific article

A designed beta-hairpin peptide for molecular recognition of ATP in water

scientific article

A peptide flavoprotein mimic: flavin recognition and redox potential modulation in water by a designed beta hairpin.

scientific article published in January 2004

A small molecule receptor that selectively recognizes trimethyl lysine in a histone peptide with native protein-like affinity

scientific article

A study of 2-component i, i + 3 peptide stapling using thioethers

scientific article published on 31 October 2017

Achieving High Affinity and Selectivity for Asymmetric Dimethylarginine by Putting a Lid on a Box

scientific article published on 12 March 2019

Arginine methylation in a beta-hairpin peptide: implications for Arg-pi interactions, DeltaCp(o), and the cold denatured state

scientific article published on 01 October 2006

Aromatic interactions

scientific article published in April 2013

Aromatic interactions in model systems

scientific article

Aromatic interactions in peptides: impact on structure and function.

scientific article

Carbohydrate-pi interactions: what are they worth?

scientific article published on 10 October 2008

Comparison of C-H...pi and hydrophobic interactions in a beta-hairpin peptide: impact on stability and specificity

scientific article published in February 2004

Contribution of aromatic interactions to alpha-helix stability

scientific article published in August 2002

Contributions of pocket depth and electrostatic interactions to affinity and selectivity of receptors for methylated lysine in water

scientific article published on 01 March 2015

Controlling peptide folding with repulsive interactions between phosphorylated amino acids and tryptophan

scientific article

Corrigendum to "A study of 2-component i, i + 3 peptide stapling using thioethers" [Bioorg. Med. Chem. 26(6) (2018) 1203-1205]

scientific article published on 06 June 2018

Design of a beta-hairpin peptide-intercalator conjugate for simultaneous recognition of single stranded and double stranded regions of RNA

scientific article published on 02 September 2009

Design of highly stabilized beta-hairpin peptides through cation-pi interactions of lysine and n-methyllysine with an aromatic pocket

scientific article published on February 2009

Development and mechanistic studies of an optimized receptor for trimethyllysine using iterative redesign by dynamic combinatorial chemistry

scientific article

Development of β-Hairpin Peptides for the Measurement of SCF-Family E3 Ligase Activity in Vitro via Ornithine Ubiquitination

scientific article published on 29 March 2017

Dueling post-translational modifications trigger folding and unfolding of a beta-hairpin peptide

scientific article published in July 2010

Dynamic cyclic thiodepsipeptide libraries from thiol-thioester exchange

scientific article

Effect of halogenation on edge-face aromatic interactions in a beta-hairpin peptide: enhanced affinity with iodo-substituents

scientific article published on 01 October 2004

Effects of chain length and N-methylation on a cation-pi interaction in a beta-hairpin peptide

scientific article published on 01 January 2007

Effects of lysine acetylation in a beta-hairpin peptide: comparison of an amide-pi and a cation-pi interaction.

scientific article

Electron transfer dynamics of peptide-derivatized RuII-polypyridyl complexes on nanocrystalline metal oxide films

article

Engineered Reader Proteins for Enhanced Detection of Methylated Lysine on Histones

scientific article published on 01 November 2019

Evaluation of a carbohydrate-pi interaction in a peptide model system

scientific article published on 28 August 2007

Fluorogenic sensor platform for the histone code using receptors from dynamic combinatorial libraries

scientific article

Folding-induced CO2-soluble peptides

scientific article published on 01 November 2007

From supramolecular chemistry to the nucleosome: studies in biomolecular recognition

scientific article

Genetically encoded fluorophenylalanines enable insights into the recognition of lysine trimethylation by an epigenetic reader

scientific article

Identification and optimization of short helical peptides with novel reactive functionality as catalysts for acyl transfer by reactive tagging

scientific article published on 01 March 2014

Identification of a p53-based portable degron based on the MDM2-p53 binding region

scientific article published on 12 October 2015

Induced-fit binding of a polyproline helix by a β-hairpin peptide

scientific article published on 28 October 2011

Influence of N-methylation on a cation-pi interaction produces a remarkably stable beta-hairpin peptide

scientific article published in May 2005

Interfacial energy conversion in Ru(II) polypyridyl-derivatized oligoproline assemblies on TiO2.

scientific article published on 26 March 2013

Investigation of Trimethyllysine Binding by the HP1 Chromodomain via Unnatural Amino Acid Mutagenesis.

scientific article

Investigation of a Catenane with a Responsive Noncovalent Network: Mimicking Long-Range Responses in Proteins.

scientific article published on 15 September 2016

Investigation of the nature of the methionine-pi interaction in beta-hairpin peptide model systems

scientific article published in September 2004

Investigation of the β-sheet interactions between dHP1 chromodomain and histone 3

scientific article published on 01 April 2015

Late stage modification of receptors identified from dynamic combinatorial libraries

scientific article

Measuring Activity in the Ubiquitin–Proteasome System: From Large Scale Discoveries to Single Cells Analysis ⬇️

scientific article published on September 1, 2013

Mechanistic Studies on the Reaction of Fischer Carbene Complex with Alkynes: Does the Alkyne Insertion Intermediate Form Irreversibly?

article

Mimicking Biological Recognition: Lessons in Binding Hydrophilic Guests in Water

scientific article published on 13 October 2020

Mimicking nature: from fundamentals to applications

scientific article published on 23 October 2009

Minimalist protein design: a beta-hairpin peptide that binds ssDNA.

scientific article

Model systems for beta-hairpins and beta-sheets

scientific article published on 11 July 2006

Molecular Recognition of Lys and Arg Methylation

scientific article

Molecular recognition with designed peptides and proteins

scientific article

More than π-π-π stacking: Contribution of Amide-π and CH-π interactions to Crotonyllysine Binding by the AF9 YEATS Domain

scientific article published on 14 September 2020

N-Gemini peptides: cytosolic protease resistance via N-terminal dimerization of unstructured peptides

scientific article

Optimization of a synthetic receptor for dimethyllysine using a biphenyl-2,6-dicarboxylic acid scaffold: insights into selective recognition of hydrophilic guests in water

scientific article

Orientation and alkylation effects on cation-pi interactions in aqueous solution

scientific article published in October 2004

Photoswitchable dynamic combinatorial libraries: coupling azobenzene photoisomerization with hydrazone exchange

scientific article

Positional effects of click cyclization on β-hairpin structure, stability, and function ⬇️

scientific article published on January 7, 2013

Positional effects of phosphoserine on β-hairpin stability ⬇️

scientific article published on September 20, 2010

Post-translational modifications: Bonds that bind

scientific article published on 01 September 2016

Pressure perturbation calorimetry of helical peptides

scientific article published in May 2006

Recognition of trimethyllysine by a chromodomain is not driven by the hydrophobic effect

scientific article

Redesign of a WW Domain Peptide for Selective Recognition of Single-Stranded DNA ⬇️

scientific article published on March 10, 2011

Secondary Binding Interactions in a Synthetic Receptor for Trimethyllysine

scientific article published on 21 October 2015

Selective aromatic interactions in beta-hairpin peptides

scientific article

Self-Assembled Multi-Component Catenanes: The Effect of Multivalency and Cooperativity on Structure and Stability ⬇️

scientific article published on July 2, 2012

Self-assembled multi-component catenanes: structural insights into an adaptable class of molecular receptors and [2]-catenanes

scientific article published on 02 July 2012

Sequence dependence of beta-hairpin structure: comparison of a salt bridge and an aromatic interaction

scientific article published in December 2003

Simple cation-pi interaction between a phenyl ring and a protonated amine stabilizes an alpha-helix in water.

scientific article

Stabilization of the N-terminal beta-hairpin of ubiquitin by a terminal hydrophobic cluster

scientific article

Structural effects on ss- and dsDNA recognition by a beta-hairpin peptide

scientific article published on 01 February 2009

Supramolecular Affinity Labeling of Histone Peptides Containing Trimethyllysine and Its Application to Histone Deacetylase Assays

scientific article published on 7 July 2016

Synthesis and electrocatalytic water oxidation by electrode-bound helical peptide chromophore-catalyst assemblies

scientific article published on 21 July 2014

Tetrameric psuedo-peptide receptors with allosteric properties

scientific article published on 01 June 2016

The Synthesis of Phenols and Quinones via Fischer Carbene Complexes

article

The geometry and efficacy of cation–π interactions in a diagonal position of a designed β‐hairpin ⬇️

scientific article published on November 1, 2003

The model student: what chemical model systems can teach us about biology

scientific article

The recognition of nucleotides with model beta-hairpin receptors: investigation of critical contacts and nucleotide selectivity

scientific article published in February 2005

The structure of well-folded beta-hairpin peptides promotes resistance to peptidase degradation

scientific article published on 01 January 2009

Tunable energy transfer rates via control of primary, secondary, and tertiary structure of a coiled coil peptide scaffold

scientific article published on 8 June 2012

Tuning HP1α Chromodomain Selectivity for Di‐ and Trimethyllysine ⬇️

scientific article published on November 4, 2011

Turn residues in beta-hairpin peptides as points for covalent modification

scientific article published on 01 September 2005

Unexpected substituent effects in offset pi-pi stacked interactions in water

scientific article (publication date: 6 March 2002)

Using changes in speciation in a dynamic combinatorial library as a fingerprint to differentiate the methylation states of arginine

scientific article published on 10 March 2020

β-Turn sequences promote stability of peptide substrates for kinases within the cytosolic environment ⬇️

scientific article published on June 20, 2013

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