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List of works by Pavitra Roychoudhury

A Fixed Spatial Structure of CD8 T Cells in Tissue during Chronic HSV-2 Infection

scientific article published on 25 July 2018

A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage

scientific article published on 31 March 2020

AAV-mediated delivery of zinc finger nucleases targeting hepatitis B virus inhibits active replication

scientific article

Adaptive regulatory substitutions affect multiple stages in the life cycle of the bacteriophage φX174

scientific article

CRISPR/Cas9 and Genome Editing for Viral Disease-Is Resistance Futile?

scientific article published on 9 March 2018

Clinical Performance Characteristics of the Swift Normalase Amplicon Panel for Sensitive Recovery of Severe Acute Respiratory Syndrome Coronavirus 2 Genomes

scientific article published in 2022

Comparative genomic, transcriptomic, and proteomic reannotation of human herpesvirus 6.

scientific article published on 20 March 2018

Cryptic transmission of SARS-CoV-2 in Washington state

scientific article published on 10 September 2020

Detection of treatment-resistant infectious HIV after genome-directed antiviral endonuclease therapy.

scientific article

Digital detection of endonuclease mediated gene disruption in the HIV provirus.

scientific article published on 2 February 2016

Dual-strain genital herpes simplex virus type 2 (HSV-2) infection in the US, Peru, and 8 countries in sub-Saharan Africa: A nested cross-sectional viral genotyping study.

scientific article published on 27 December 2017

Fitness benefits of low infectivity in a spatially structured population of bacteriophages

scientific article published on 13 November 2013

Gene editing and elimination of latent herpes simplex virus in vivo

scientific article published on 18 August 2020

Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California ⬇️

scientific article published on 08 June 2020

Herpes simplex virus lymphadenitis is associated with tumor reduction in a chronic lymphocytic leukemia patient

scientific article published on 21 July 2022

Highly conserved intragenic HSV-2 sequences: Results from next-generation sequencing of HSV-2 UL and US regions from genital swabs collected from 3 continents

scientific article

Hybrid nanocarriers incorporating mechanistically distinct drugs for lymphatic CD4 T cell activation and HIV-1 latency reversal

article

In vivo antiviral host response to SARS-CoV-2 by viral load, sex, and age

scientific article published on 22 June 2020

In vivo antiviral host transcriptional response to SARS-CoV-2 by viral load, sex, and age

scientific article published on 08 September 2020

In vivo dynamics of AAV-mediated gene delivery to sensory neurons of the trigeminal ganglia

scientific article

Large, stable, contemporary interspecies recombination events in circulating human herpes simplex viruses

scientific article published on 01 March 2020

Molecular Analysis of SARS-CoV-2 Lineages in Armenia

scientific article published on 17 May 2022

Pharmacodynamics of anti-HIV gene therapy using viral vectors and targeted endonucleases.

scientific article published on 18 April 2016

The clinical and genomic epidemiology of seasonal human coronaviruses in congregate homeless shelter settings: A repeated cross-sectional study

scientific article published in 2022

The impact of spatial structure on viral genomic diversity generated during adaptation to thermal stress

scientific article

Tissue memory CD4+ T cells expressing IL-7 receptor-alpha (CD127) preferentially support latent HIV-1 infection

scientific article published on 30 April 2020

Tissue-resident T cell derived cytokines eliminate herpes simplex virus-2 infected cells

scientific article published on 03 March 2020

Tuning DNA binding affinity and cleavage specificity of an engineered gene-targeting nuclease via surface display, flow cytometry and cellular analyses

scientific article published on July 2017

Viral diversity is an obligate consideration in CRISPR/Cas9 designs for targeting the HIV reservoir.

scientific article published on 11 July 2018

Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State

scientific article published on 30 September 2020

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