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List of works by Kathryn R. Elmer

A hybrid genetic linkage map of two ecologically and morphologically divergent Midas cichlid fishes (Amphilophus spp.) obtained by massively parallel DNA sequencing (ddRADSeq)

scientific article (publication date: 2013)

Adaptation in the age of ecological genomics: insights from parallelism and convergence ⬇️

scientific article published on 02 April 2011

Allopatric diversification and evolutionary melting pot in a North African Palearctic relict: The biogeographic history of Salamandra algira

scientific article published on 12 October 2018

Alternative splicing and gene expression play contrasting roles in the parallel phenotypic evolution of a salmonid fish

scientific article published on 18 February 2021

Applying new inter-individual approaches to assess fine-scale population genetic diversity in a neotropical frog, Eleutherodactylus ockendeni.

scientific article

Barrier loci and progress towards evolutionary generalities

scientific article

Chromosome-level assembly of the common lizard (Zootoca vivipara) genome

Color assortative mating contributes to sympatric divergence of neotropical cichlid fish.

scientific article published on 28 May 2009

Common lizards break Dollo’s law of irreversibility: Genome-wide phylogenomics support a single origin of viviparity and re-evolution of oviparity

scientific article published on 24 May 2018

Correction to: De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species.

scientific article published on 11 June 2018

Crater lake cichlids individually specialize along the benthic-limnetic axis

scientific article published on 7 March 2014

Crater lake colonization by neotropical cichlid fishes

scientific article published on 27 August 2012

Crater lake habitat predicts morphological diversity in adaptive radiations of cichlid fishes

scientific article

Cryptic diversity and deep divergence in an upper Amazonian leaflitter frog, Eleutherodactylus ockendeni

scientific article

De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species

scientific article published on 8 January 2018

Differential reproductive investment in co-occurring oviparous and viviparous common lizards (Zootoca vivipara) and implications for life-history trade-offs with viviparity.

scientific article published on 6 May 2019

Distinct telomere differences within a reproductively bimodal common lizard population

scientific article published on 30 July 2019

Double-digest RAD sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with nonmodel organisms.

scientific article published on 23 March 2015

Early Miocene origin and cryptic diversification of South American salamanders

scientific article published in 2013

Ecological and Lineage-Specific Factors Drive the Molecular Evolution of Rhodopsin in Cichlid Fishes.

scientific article published on 17 July 2015

Ecosystem size predicts eco-morphological variability in a postglacial diversification

scientific article

Genetic evidence for panmixia in a colony-breeding crater lake cichlid fish.

scientific article published on 18 January 2018

Genetic fingerprinting of salmon louse (Lepeophtheirus salmonis) populations in the North-East Atlantic using a random forest classification approach

scientific article published on 19 January 2018

Genetic linkage of distinct adaptive traits in sympatrically speciating crater lake cichlid fish

scientific article

Genomic architecture of ecologically divergent body shape in a pair of sympatric crater lake cichlid fishes

scientific article published on 16 December 2013

Genomic signatures of divergent selection and speciation patterns in a 'natural experiment', the young parallel radiations of Nicaraguan crater lake cichlid fishes

scientific article published on 30 August 2012

Genomics of adaptation and speciation in cichlid fishes: recent advances and analyses in African and Neotropical lineages

scientific article

Geographic separation and genetic differentiation of populations are not coupled with niche differentiation in threatened Kaiser's spotted newt (Neurergus kaiseri)

scientific article published on 17 April 2019

Inferring the shallow phylogeny of true salamanders (Salamandra) by multiple phylogenomic approaches.

scientific article published on 14 July 2017

Intra-lake origin and rapid expansion of invasive pelagic three-spined stickleback in Lake Constance

scientific article published in 2024

Intraspecific variation and structuring of phenotype in a lake-dwelling species are driven by lake size and elevation

scientific article published on 16 August 2020

Investigating the genetic basis of vertebrate dispersal combining <scp>RNA</scp>‐seq, <scp>RAD</scp>‐seq and quantitative genetics

scientific article published on 26 March 2023

Local variation and parallel evolution: morphological and genetic diversity across a species complex of neotropical crater lake cichlid fishes

scientific article

Multi-gene phylogeny of Madagascar's plated lizards, Zonosaurus and Tracheloptychus (Squamata: Gerrhosauridae).

scientific article

Parallel evolution of Nicaraguan crater lake cichlid fishes via non-parallel routes.

scientific article

Parallel selection on ecologically relevant gene functions in the transcriptomes of highly diversifying salmonids

scientific article published on 23 December 2019

Parallelism in eco-morphology and gene expression despite variable evolutionary and genomic backgrounds in a Holarctic fish

scientific article published on 17 April 2020

Parsing parallel evolution: ecological divergence and differential gene expression in the adaptive radiations of thick-lipped Midas cichlid fishes from Nicaragua

scientific article published on 12 October 2012

Phylogeny and species delimitation of near Eastern Neurergus newts (Salamandridae) based on genome-wide RADseq data analysis

scientific article published on 16 January 2019

Pitfalls and virtues of population genetic summary statistics: detecting selective sweeps in recent divergences

scientific article published on 13 November 2020

Pleistocene desiccation in East Africa bottlenecked but did not extirpate the adaptive radiation of Lake Victoria haplochromine cichlid fishes

scholarly article

Positive Darwinian selection drives the evolution of the morphology-related gene, EPCAM, in particularly species-rich lineages of African cichlid fishes

scientific article published on 03 August 2011

Rapid adaptation through genomic and epigenomic responses following translocations in an endangered salmonid

scientific article published on 06 July 2021

Rapid and parallel adaptive evolution of the visual system of Neotropical Midas cichlid fishes.

scientific article published on 21 April 2017

Rapid evolution and selection inferred from the transcriptomes of sympatric crater lake cichlid fishes

scientific article

Rapid intralacustrine evolution of an invasive pelagic three-spined stickleback ( Gasterosteus aculeatus ) ecotype in Lake Constance

Rapid niche expansion by selection on functional genomic variation after ecosystem recovery

scientific article published on 03 December 2018

Rapid sympatric ecological differentiation of crater lake cichlid fishes within historic times

scientific article

Rapid sympatric ecological differentiation of crater lake cichlid fishes within historic times

article

Significant Synteny and Colocalization of Ecologically Relevant Quantitative Trait Loci Within and Across Species of Salmonid Fishes.

scientific article published on 31 July 2017

Sympatric ecological divergence associated with a color polymorphism.

scientific article published on 5 October 2015

Sympatric speciation without borders?

scientific article published in May 2010

The Genetic Architecture Underlying the Evolution of a Rare Piscivorous Life History Form in Brown Trout after Secondary Contact and Strong Introgression

scientific article published on 31 May 2018

Vector species-specific association between natural Wolbachia infections and avian malaria in black fly populations.

scientific article published on 8 March 2018

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