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List of works by Ivo Glynne Gut

A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797)

scientific article published on 18 May 2023

A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing.

scientific article

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

A global catalog of whole-genome diversity from 233 primate species

A single-cell tumor immune atlas for precision oncology

scientific article published in October 2021

Activity of imipenem/relebactam against a Spanish nationwide collection of carbapenemase-producing Enterobacterales

scientific article published on 3 March 2021

An Improved Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry Data Analysis Pipeline for the Identification of Carbapenemase-Producing Klebsiella pneumoniae

scientific article published on 18 June 2021

Benchmarking single-cell RNA-sequencing protocols for cell atlas projects

scientific article published on 06 April 2020

Chromatin activation as a unifying principle underlying pathogenic mechanisms in multiple myeloma

scientific article published on 20 August 2020

Chromatin-Based Classification of Genetically Heterogeneous AMLs into Two Distinct Subtypes with Diverse Stemness Phenotypes

scientific article published on 01 January 2019

Comparative analysis of neutrophil and monocyte epigenomes

Convert-Pheno: A software toolkit for the interconversion of standard data models for phenotypic data

scientific article published in January 2024

Correction to: Solving patients with rare diseases through programmatic reanalysis of genome-phenome data

scientific article published in September 2021

DNA methylation in human gastric epithelial cells allows cell type-related plasticity and defines regional identity

scientific article published on 29 March 2022

DNA sequencing – spanning the generations ⬇️

scientific article published on November 16, 2012

Decoding the DNA Methylome of Mantle Cell Lymphoma in the Light of the Entire B Cell Lineage.

scientific article published on November 2016

Distinct Trends of DNA Methylation Patterning in the Innate and Adaptive Immune Systems

scientific article published in November 2016

Dynamics of Transcription Regulation in Human Bone Marrow Myeloid Differentiation to Mature Blood Neutrophils

scientific article published on 01 September 2018

Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation

scientific article published on 28 January 2021

Emergence of 16S rRNA methyltransferases among carbapenemase-producing Enterobacterales in Spain studied by whole-genome sequencing

scientific article published in January 2022

Enhancing Semantic Interoperability in Precision Medicine: Converting OMOP CDM to Beacon v2 in the Spanish IMPaCT-Data Project

scientific article published on 28 December 2024

Framework for quality assessment of whole genome cancer sequences

scientific article published on 07 October 2020

Gender specific airway gene expression in COPD sub-phenotypes supports a role of mitochondria and of different types of leukocytes

scientific article published on 18 June 2021

Impact of DNA methylation on 3D genome structure

scientific article published on 28 May 2021

Lung microbiome composition and bronchial epithelial gene expression in patients with COPD versus healthy individuals: a bacterial 16S rRNA gene sequencing and host transcriptomic analysis

scientific article published in July 2021

Multi-organ single-cell transcriptomics of immune cells uncovered organ-specific gene expression and functions

scientific article published on 27 March 2024

Multi-organ single-cell transcriptomics of immune cells uncovered organ-specific gene expression and functions

scientific article published on 31 May 2023

New sequencing technologies ⬇️

scientific article published on July 12, 2013

Novel method for multiplexed full-length single-molecule sequencing of the human mitochondrial genome

scientific article published on 8 February 2022

Occurrence of the Gene in the -Harboring Plasmids: Adverse Clinical Impact for Direct Tracking of KPC-Producing by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

scientific article published on 19 July 2021

PLCγ1/PKCθ Downstream Signaling Controls Cutaneous T-Cell Lymphoma Development and Progression

scientific article published in May 2022

Phenotypic spectrum and genomics of undiagnosed arthrogryposis multiplex congenita

scientific article published on 5 April 2021

RD-Connect, NeurOmics and EURenOmics: collaborative European initiative for rare diseases.

scientific article published on 27 February 2018

Recurrent somatic mutations reveal new insights into consequences of mutagenic processes in cancer

scientific article published on 25 November 2019

SPOTlight: seeded NMF regression to deconvolute spatial transcriptomics spots with single-cell transcriptomes

scientific article published on 21 May 2021

Single cell RNA-seq identifies the origins of heterogeneity in efficient cell transdifferentiation and reprogramming

scientific article published on 12 March 2019

Solving patients with rare diseases through programmatic reanalysis of genome-phenome data

scientific article published on 01 June 2021

Systemic Inflammation in Preclinical Ulcerative Colitis

scientific article published in November 2021

Ten simple rules for a successful international consortium in big data omics

scientific article published in 2022

The landscape of tolerated genetic variation in humans and primates

The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia

scientific article published on 21 May 2018

The ulcerative colitis associated gene FUT8 regulates the quantity and quality of secreted mucins

scientific article published on 30 November 2021

Whole-genome fingerprint of the DNA methylome during human B cell differentiation

scientific article

gemBS: high throughput processing for DNA methylation data from bisulfite sequencing

scientific article published on 01 March 2019

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