List of works - Dorothee Staiger

A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate.

scientific article published in April 2017

A Nuclear Factor Recognizing a Positive Regulatory Upstream Element of the Antirrhinum majus Chalcone Synthase Promoter.

scientific article

A circadian clock-regulated toggle switch explains AtGRP7 and AtGRP8 oscillations in Arabidopsis thaliana

scientific article

A glycine-rich RNA-binding protein affects gibberellin biosynthesis in Arabidopsis.

scientific article published on 27 November 2013

A new set of reversibly photoswitchable fluorescent proteins for use in transgenic plants

scientific article

A proteomic analysis of oligo(dT)-bound mRNP containing oxidative stress-induced Arabidopsis thaliana RNA-binding proteins ATGRP7 and ATGRP8.

scientific article

A type III effector ADP-ribosylates RNA-binding proteins and quells plant immunity

scientific article published in Nature

Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7.

scientific article published on 31 October 2017

Alternative splicing at the intersection of biological timing, development, and stress responses

scientific article published on 31 October 2013

Arabidopsis transportin1 is the nuclear import receptor for the circadian clock-regulated RNA-binding protein AtGRP7.

scientific article published on September 2003

At GRP7, a nuclear RNA-binding protein as a component of a circadian-regulated negative feedback loop in Arabidopsis thaliana ⬇️

scientific article published on August 5, 1997

Auto-regulation of the circadian slave oscillator component AtGRP7 and regulation of its targets is impaired by a single RNA recognition motif point mutation.

scientific article published on 8 October 2007

Beyond Transcription: Fine-Tuning of Circadian Timekeeping by Post-Transcriptional Regulation

article

Bioinformatic evaluation of L-arginine catabolic pathways in 24 cyanobacteria and transcriptional analysis of genes encoding enzymes of L-arginine catabolism in the cyanobacterium Synechocystis sp. PCC 6803.

scientific article

Changes in conformational dynamics of mRNA upon AtGRP7 binding studied by fluorescence correlation spectroscopy.

scientific article

Characterization of the putative iron sulfur protein IdiC (ORF5) in Synechococcus elongatus PCC 7942

scientific article published on 10 August 2007

Chromatin marks and ambient temperature-dependent flowering strike up a novel liaison

scientific article published on 19 June 2017

Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element

scientific article published on 01 June 1999

Computational exploration of cis-regulatory modules in rhythmic expression data using the "Exploration of Distinctive CREs and CRMs" (EDCC) and "CRM Network Generator" (CNG) programs.

scientific article published on 3 January 2018

Determination of photoperiodic flowering time control in Arabidopsis and barley

scientific article published in January 2014

Differential control of pre-invasive and post-invasive antibacterial defense by the Arabidopsis circadian clock

scientific article published on 27 June 2014

Enter exitrons

scientific article published on 7 July 2015

Genome-wide identification and phylogenetic analysis of plant RNA binding proteins comprising both RNA recognition motifs and contiguous glycine residues.

scientific article published on 20 November 2015

Global transcript profiling of transgenic plants constitutively overexpressing the RNA-binding protein AtGRP7.

scientific article

Molecular characterization of two cDNAs from Sinapis alba L. expressed specifically at an early stage of tapetum development.

scientific article published on October 1993

Molecular mechanisms of plant acclimation to changing environments

scientific article published on 01 January 2019

Monitoring Alternative Splicing Changes in Arabidopsis Circadian Clock Genes.

scientific article published in January 2016

Mutational definition of binding requirements of an hnRNP-like protein in Arabidopsis using fluorescence correlation spectroscopy

scientific article published on 22 September 2014

Plastid targeting strategies for cyanophycin synthetase to achieve high-level polymer accumulation in Nicotiana tabacum

scientific article published on 13 February 2008

Pre-mRNA Splicing in Plants: In Vivo Functions of RNA-Binding Proteins Implicated in the Splicing Process

scientific article

Pseudomonas HopU1 modulates plant immune receptor levels by blocking the interaction of their mRNAs with GRP7

scientific journal article

Purification of tobacco nuclear proteins binding to a CACGTG motif of the chalcone synthase promoter by DNA affinity chromatography ⬇️

scientific article published on August 1, 1991

Quantitative analysis of single-molecule RNA-protein interaction.

scientific article published on June 2009

RNA around the clock - regulation at the RNA level in biological timing

scientific article

RNA-Binding Protein Immunoprecipitation and High-Throughput Sequencing

scientific article published on 01 January 2021

RNA-Binding Proteins Revisited - The Emerging Arabidopsis mRNA Interactome

scientific article

RNA-binding protein immunoprecipitation from whole-cell extracts

scientific article published in January 2014

RNA-binding proteins and circadian rhythms in Arabidopsis thaliana.

scientific article

RNA-protein interaction mediating post-transcriptional regulation in the circadian system.

scientific article published in January 2009

Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis.

scientific article

Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis.

scientific article

Reversible Photoswitchable DRONPA-s Monitors Nucleocytoplasmic Transport of an RNA-Binding Protein in Transgenic Plants

article

SRR1 is essential to repress flowering in non-inductive conditions in Arabidopsis thaliana

scientific article published on 16 August 2014

Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity

scientific article published on 22 September 2013

Spotlight on post-transcriptional control in the circadian system ⬇️

scientific article published on August 30, 2010

Stochastic Variation in DNA Methylation Modulates Nucleosome Occupancy and Alternative Splicing in <i>Arabidopsis thaliana</i>

scientific article published on 19 April 2022

The Arabidopsis SRR1 gene mediates phyB signaling and is required for normal circadian clock function

scientific journal article

The RIPper case: identification of RNA-binding protein targets by RNA immunoprecipitation

scientific article published in January 2014

The circadian clock goes genomic

scientific article published on 24 June 2013

The circadian clock regulated RNA-binding protein AtGRP7 autoregulates its expression by influencing alternative splicing of its own pre-mRNA

scientific article published on 01 January 2003

The plant leaf movement analyzer (PALMA): a simple tool for the analysis of periodic cotyledon and leaf movement in Arabidopsis thaliana

scientific article published on 3 January 2017

Time to Network: The Molecular Blueprint of the Circadian Timing System in Plants

article

Time to flower: interplay between photoperiod and the circadian clock

scientific article

Transcript profiling indicates that the absence of PsbO affects the coordination of C and N metabolism in Synechocystis sp. PCC 6803.

scientific article published in July 2008

Tuber-specific cphA expression to enhance cyanophycin production in potatoes

scientific article published on 13 October 2009

Ultraviolet-B radiation-mediated responses in plants. Balancing damage and protection.

scientific article published on December 2003

cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin/oxalate oxidase-like proteins.

scientific article published on November 1997

List of works by Dorothee Staiger

A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate.

A Nuclear Factor Recognizing a Positive Regulatory Upstream Element of the Antirrhinum majus Chalcone Synthase Promoter.

A circadian clock-regulated toggle switch explains AtGRP7 and AtGRP8 oscillations in Arabidopsis thaliana

A glycine-rich RNA-binding protein affects gibberellin biosynthesis in Arabidopsis.

A new set of reversibly photoswitchable fluorescent proteins for use in transgenic plants

A proteomic analysis of oligo(dT)-bound mRNP containing oxidative stress-induced Arabidopsis thaliana RNA-binding proteins ATGRP7 and ATGRP8.

A type III effector ADP-ribosylates RNA-binding proteins and quells plant immunity

Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7.

Alternative splicing at the intersection of biological timing, development, and stress responses

Arabidopsis transportin1 is the nuclear import receptor for the circadian clock-regulated RNA-binding protein AtGRP7.

At GRP7, a nuclear RNA-binding protein as a component of a circadian-regulated negative feedback loop in Arabidopsis thaliana ⬇️

Auto-regulation of the circadian slave oscillator component AtGRP7 and regulation of its targets is impaired by a single RNA recognition motif point mutation.

Beyond Transcription: Fine-Tuning of Circadian Timekeeping by Post-Transcriptional Regulation

Bioinformatic evaluation of L-arginine catabolic pathways in 24 cyanobacteria and transcriptional analysis of genes encoding enzymes of L-arginine catabolism in the cyanobacterium Synechocystis sp. PCC 6803.

Changes in conformational dynamics of mRNA upon AtGRP7 binding studied by fluorescence correlation spectroscopy.

Characterization of the putative iron sulfur protein IdiC (ORF5) in Synechococcus elongatus PCC 7942

Chromatin marks and ambient temperature-dependent flowering strike up a novel liaison

Circadian clock-regulated expression of an RNA-binding protein in Arabidopsis: characterisation of a minimal promoter element

Computational exploration of cis-regulatory modules in rhythmic expression data using the "Exploration of Distinctive CREs and CRMs" (EDCC) and "CRM Network Generator" (CNG) programs.

Determination of photoperiodic flowering time control in Arabidopsis and barley

Differential control of pre-invasive and post-invasive antibacterial defense by the Arabidopsis circadian clock

Enter exitrons

Genome-wide identification and phylogenetic analysis of plant RNA binding proteins comprising both RNA recognition motifs and contiguous glycine residues.

Global transcript profiling of transgenic plants constitutively overexpressing the RNA-binding protein AtGRP7.

Molecular characterization of two cDNAs from Sinapis alba L. expressed specifically at an early stage of tapetum development.

Molecular mechanisms of plant acclimation to changing environments

Monitoring Alternative Splicing Changes in Arabidopsis Circadian Clock Genes.

Mutational definition of binding requirements of an hnRNP-like protein in Arabidopsis using fluorescence correlation spectroscopy

Plastid targeting strategies for cyanophycin synthetase to achieve high-level polymer accumulation in Nicotiana tabacum

Pre-mRNA Splicing in Plants: In Vivo Functions of RNA-Binding Proteins Implicated in the Splicing Process

Pseudomonas HopU1 modulates plant immune receptor levels by blocking the interaction of their mRNAs with GRP7

Purification of tobacco nuclear proteins binding to a CACGTG motif of the chalcone synthase promoter by DNA affinity chromatography ⬇️

Quantitative analysis of single-molecule RNA-protein interaction.

RNA around the clock - regulation at the RNA level in biological timing

RNA-Binding Protein Immunoprecipitation and High-Throughput Sequencing

RNA-Binding Proteins Revisited - The Emerging Arabidopsis mRNA Interactome

RNA-binding protein immunoprecipitation from whole-cell extracts

RNA-binding proteins and circadian rhythms in Arabidopsis thaliana.

RNA-protein interaction mediating post-transcriptional regulation in the circadian system.

Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis.

Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis.

Reversible Photoswitchable DRONPA-s Monitors Nucleocytoplasmic Transport of an RNA-Binding Protein in Transgenic Plants

SRR1 is essential to repress flowering in non-inductive conditions in Arabidopsis thaliana

Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity

Spotlight on post-transcriptional control in the circadian system ⬇️

Stochastic Variation in DNA Methylation Modulates Nucleosome Occupancy and Alternative Splicing in <i>Arabidopsis thaliana</i>

The Arabidopsis SRR1 gene mediates phyB signaling and is required for normal circadian clock function

The RIPper case: identification of RNA-binding protein targets by RNA immunoprecipitation

The circadian clock goes genomic

The circadian clock regulated RNA-binding protein AtGRP7 autoregulates its expression by influencing alternative splicing of its own pre-mRNA

The plant leaf movement analyzer (PALMA): a simple tool for the analysis of periodic cotyledon and leaf movement in Arabidopsis thaliana

Time to Network: The Molecular Blueprint of the Circadian Timing System in Plants

Time to flower: interplay between photoperiod and the circadian clock

Transcript profiling indicates that the absence of PsbO affects the coordination of C and N metabolism in Synechocystis sp. PCC 6803.

Tuber-specific cphA expression to enhance cyanophycin production in potatoes

Ultraviolet-B radiation-mediated responses in plants. Balancing damage and protection.

cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin/oxalate oxidase-like proteins.