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List of works by Issam El Naqa

4D-CT motion estimation using deformable image registration and 5D respiratory motion modeling.

scientific article published in October 2008

A 4D biomechanical lung phantom for joint segmentation/registration evaluation

scientific article

A Bayesian network approach for modeling local failure in lung cancer.

scientific article

A comparative analysis of longitudinal computed tomography and histopathology for evaluating the potential of mesenchymal stem cells in mitigating radiation-induced pulmonary fibrosis.

scientific article published on 22 August 2017

A fast inverse consistent deformable image registration method based on symmetric optical flow computation

scientific article published on 14 October 2008

A fast inverse consistent deformable image registration method based on symmetric optical flow computation

A multiobjective Bayesian networks approach for joint prediction of tumor local control and radiation pneumonitis in nonsmall-cell lung cancer (NSCLC) for response-adapted radiotherapy.

scientific article published on 4 June 2018

A prediction model for early death in non-small cell lung cancer patients following curative-intent chemoradiotherapy.

scientific article published on 14 October 2017

A radiomics model from joint FDG-PET and MRI texture features for the prediction of lung metastases in soft-tissue sarcomas of the extremities.

scientific article published on 29 June 2015

Adaptive learning for relevance feedback: application to digital mammography.

scientific article

Analytical modelling of regional radiotherapy dose response of lung.

scientific article published on 9 May 2012

Artificial Neural Network with Composite Architectures for Prediction of Local Control in Radiotherapy

scientific article published on 29 November 2018

Bayesian network ensemble as a multivariate strategy to predict radiation pneumonitis risk

scientific article published on May 2015

Beyond imaging: The promise of radiomics.

scientific article published on 05 June 2017

Big Data Analytics for Prostate Radiotherapy

scientific article

Bioinformatics methods for learning radiation-induced lung inflammation from heterogeneous retrospective and prospective data

scientific article published on 28 May 2009

Can radiomics personalise immunotherapy?

scientific article published on 14 August 2018

Characterization of the Tumor Immune Microenvironment Identifies M0 Macrophage-Enriched Cluster as a Poor Prognostic Factor in Hepatocellular Carcinoma

scientific article published on 01 October 2020

Cherenkov emission-based external radiotherapy dosimetry: I. Formalism and feasibility

scientific article published on 29 April 2019

Cherenkov emission-based external radiotherapy dosimetry: II. Electron beam quality specification and uncertainties

scientific article published on 29 April 2019

Combined PET/CT image characteristics for radiotherapy tumor response in lung cancer

scientific article published on 16 November 2011

Combining handcrafted features with latent variables in machine learning for prediction of radiation-induced lung damage

scientific article published on 08 April 2019

Comparative methods for PET image segmentation in pharyngolaryngeal squamous cell carcinoma

scientific article published in May 2012

Computer-aided detection and diagnosis of breast cancer with mammography: recent advances.

scientific article published on 20 January 2009

Contrasting analytical and data-driven frameworks for radiogenomic modeling of normal tissue toxicities in prostate cancer.

scientific article

Current role of PET in oncology: Potentials and challenges in the management of non-small cell lung cancer

Datamining approaches for modeling tumor control probability

scientific article published on 2 March 2010

Deformable registration of abdominal kilovoltage treatment planning CT and tomotherapy daily megavoltage CT for treatment adaptation

scientific article published on February 2009

Determination of planning target volume for whole stomach irradiation using daily megavoltage computed tomographic images.

scientific article published on 3 March 2012

Developing and Validating a Survival Prediction Model for NSCLC Patients Through Distributed Learning Across 3 Countries.

scientific article published on 24 April 2017

Development of a Fully Cross-Validated Bayesian Network Approach for Local Control Prediction in Lung Cancer

scientific article published on 02 May 2018

Distribution of lung tissue hysteresis during free breathing.

scientific article

Dosimetric consequences of uncorrected setup errors in helical Tomotherapy treatments of breast-cancer patients

scientific article published on 03 September 2009

Dosimetric predictors of chest wall pain after lung stereotactic body radiotherapy

scientific article published on 03 March 2012

Early Changes in Serial CBCT-Measured Parotid Gland Biomarkers Predict Chronic Xerostomia After Head and Neck Radiation Therapy

scientific article published on 10 July 2018

Early and late lung radiographic injury following stereotactic body radiation therapy (SBRT)

scientific article published on 11 November 2009

Elective clinical target volumes for conformal therapy in anorectal cancer: a radiation therapy oncology group consensus panel contouring atlas.

scientific article published on 29 December 2008

Enhancement of multimodality texture-based prediction models via optimization of PET and MR image acquisition protocols: a proof of concept.

scientific article published on 5 September 2017

Erratum: "Machine learning algorithms for outcome prediction in (chemo)radiotherapy: An empirical comparison of classifiers" [Med. Phys. 45 (7), 3449-3459 (2018)]

scientific article published on 07 January 2019

Esophageal carcinoma with celiac nodal metastases; curative or palliative?

scientific article published on 01 July 2008

Estimation of setup uncertainty using planar and MVCT imaging for gynecologic malignancies.

scientific article published on 4 June 2008

Event (error and near-miss) reporting and learning system for process improvement in radiation oncology.

scientific article published in September 2010

Experimental evaluation of x-ray acoustic computed tomography for radiotherapy dosimetry applications

scientific article

Exploring feature-based approaches in PET images for predicting cancer treatment outcomes.

scientific article published on June 2009

FDG-PET-based prognostic nomograms for locally advanced cervical cancer.

scientific article published on 24 June 2012

Glioblastoma in Children: A Single-Institution Experience ⬇️

scientific article published on January 8, 2011

Head and Neck Tumor Control Probability: Radiation Dose-Volume Effects in Stereotactic Body Radiation Therapy for Locally Recurrent Previously-Irradiated Head and Neck Cancer: Report of the AAPM Working Group.

scientific article published on 31 January 2018

Heart irradiation as a risk factor for radiation pneumonitis.

scientific article

Image-Guided Fluorescence Endomicroscopy: From Macro- to Micro-Imaging of Radiation-Induced Pulmonary Fibrosis

scientific article published on 19 December 2017

Immunomodulatory Effects of Stereotactic Body Radiation Therapy: Preclinical Insights and Clinical Opportunities

scientific article published on 02 March 2019

Improving Clinical Relevance in Ensemble Support Vector Machine Models of Radiation Pneumonitis Risk

In vivo IVUS-based 3-D fluid-structure interaction models with cyclic bending and anisotropic vessel properties for human atherosclerotic coronary plaque mechanical analysis.

scientific article

Introduction to Big Data in Radiation Oncology: Exploring Opportunities for Research, Quality Assessment, and Clinical Care

scientific article published in July 2016

Investigation of a breathing surrogate prediction algorithm for prospective pulmonary gating.

scientific article published on March 2011

Learning a channelized observer for image quality assessment

scientific article

Lessons From Large-Scale Collection of Patient-Reported Outcomes: Implications for Big Data Aggregation and Analytics.

scientific article

Liver metastasis restrains immunotherapy efficacy via macrophage-mediated T cell elimination

scientific article published on 04 January 2021

Local Control After Stereotactic Body Radiation Therapy for Stage I Non-Small Cell Lung Cancer

scientific article published on 05 April 2019

Long-term outcome in children treated for craniopharyngioma with and without radiotherapy

scientific article published on 01 February 2008

Machine Learning and Imaging Informatics in Oncology

scientific article published on 23 November 2018

Machine learning algorithms for outcome prediction in (chemo)radiotherapy: An empirical comparison of classifiers

scientific article published on 13 June 2018

Machine learning and modeling: Data, validation, communication challenges

scientific article published on 24 August 2018

Machine learning for automated quality assurance in radiotherapy: A proof of principle using EPID data description

scientific article published on 04 March 2019

Mesenchymal Stem Cells Adopt Lung Cell Phenotype in Normal and Radiation-induced Lung Injury Conditions

scientific article published on 18 July 2015

Modeling Patient-Specific Dose-Function Response for Enhanced Characterization of Personalized Functional Damage

scientific article published on 01 June 2018

Modeling of Normal Tissue Complications Using Imaging and Biomarkers After Radiation Therapy for Hepatocellular Carcinoma.

scientific article published in February 2018

Modeling the risk of radiation-induced acute esophagitis for combined Washington University and RTOG trial 93-11 lung cancer patients

scientific article published on 14 June 2011

Monte Carlo role in radiobiological modelling of radiotherapy outcomes

scientific article published on 09 May 2012

NCTN Assessment on Current Applications of Radiomics in Oncology

scientific article published on 31 January 2019

Non-invasive whole-body plethysmograph for assessment and prediction of radiation-induced lung injury using simultaneously acquired nitric oxide and lung volume measurements.

scientific article

Nonlinear Kernel-Based Approaches for Predicting Normal Tissue Toxicities

article

Novel multimodality segmentation using level sets and Jensen-Rényi divergence.

scientific article published in December 2013

On the Detectability of Acoustic Waves Induced Following Irradiation by a Radiotherapy Linear Accelerator

scientific article published on 11 February 2016

On the Fuzziness of Machine Learning, Neural Networks, and Artificial Intelligence in Radiation Oncology.

scientific article published in January 2018

On the consistency of Monte Carlo track structure DNA damage simulations.

scientific article published on December 2014

Outcome modeling techniques for prostate cancer radiotherapy: Data, models, and validation

scientific article

Patterns of failure after stereotactic body radiation therapy or lobar resection for clinical stage I non-small-cell lung cancer.

scientific article published in February 2013

Perspectives on making big data analytics work for oncology.

scientific article

Physics: The Use of Magnetic Resonance Imaging for Radiation Therapy is Accelerating in Utility and Novelty

scientific article published on 11 November 2015

Precision radiotherapy via information integration of expert human knowledge and AI recommendation to optimize clinical decision making

scientific article published on 01 June 2022

Predicting Local Failure in Lung Cancer Using Bayesian Networks

Predicting radiotherapy outcomes using statistical learning techniques.

scientific article

Prediction of both conserved and nonconserved microRNA targets in animals.

scientific article

Prediction of skin dose in low-kV intraoperative radiotherapy using machine learning models trained on results of in vivo dosimetry

scientific article published on 25 January 2019

Proton and light ion RBE for the induction of direct DNA double strand breaks

scientific article

RTOG GU Radiation oncology specialists reach consensus on pelvic lymph node volumes for high-risk prostate cancer

scientific article

Radiation Therapy Outcomes Models in the Era of Radiomics and Radiogenomics: Uncertainties and Validation

scientific article published on 18 October 2018

Radiation dose-volume effects in the brain.

scientific article published on March 2010

Radiation dose-volume effects in the lung.

scientific article published on March 2010

Radiation-Induced Edema After Single-Fraction or Multifraction Stereotactic Radiosurgery for Meningioma: A Critical Review

scientific article published on 29 March 2018

Radiogenomics and radiotherapy response modeling.

scientific article

Radiogenomics is the future of treatment response assessment in clinical oncology

scientific article published on 21 June 2018

Radiomics in precision medicine for lung cancer.

scientific article published in December 2017

Radiomics strategies for risk assessment of tumour failure in head-and-neck cancer.

scientific article published on 31 August 2017

SU-D-BRB-03: Prediction of Tumor Outcomes Through Wavelet Image Fusion and Texture Analysis of PET/MR Imaging

scientific article published on June 2012

SU-E-I-04: Implementation of a Fast Monte Carlo Scatter Correction for Cone- Beam Computed Tomography

scientific article published on June 2012

SU-E-J-110: A Novel Level Set Active Contour Algorithm for Multimodality Joint Segmentation/Registration Using the Jensen-Rényi Divergence

scientific article published in June 2012

SU-E-T-05: Comparing DNA Strand Break Yields for Photons under Different Irradiation Conditions with Geant4-DNA.

scientific article published on June 2012

Sci-Fri PM: Delivery - 12: Scatter-B-Gon: Implementing a fast Monte Carlo cone-beam computed tomography scatter correction on real data.

scientific article

Serum Levels of Hepatocyte Growth Factor and CD40 Ligand Predict Radiation-Induced Liver Injury

scientific article published on 09 May 2019

Single- and Multi-Fraction Stereotactic Radiosurgery Dose Tolerances of the Optic Pathways

scientific article published on 31 January 2018

Special section: Selected papers from the Fifth International Workshop on Monte Carlo Techniques in Medical Physics

scientific article published on 10 June 2015

Special section: Selected papers from the Fourth International Workshop on Recent Advances in Monte Carlo Techniques for Radiation Therapy.

scientific article published in June 2012

Stereotactic body radiation therapy for early-stage non-small-cell lung cancer: the pattern of failure is distant.

scientific article published on 30 September 2009

Technical note: DIRART--A software suite for deformable image registration and adaptive radiotherapy research.

scientific article

Technical note: deformable image registration on partially matched images for radiotherapy applications

scientific article published on January 2010

The Image Biomarker Standardization Initiative: Standardized Quantitative Radiomics for High-Throughput Image-based Phenotyping

scientific article published on 10 March 2020

Toward a standard for the evaluation of PET-Auto-Segmentation methods following the recommendations of AAPM task group No. 211: Requirements and implementation

scientific article published on 5 May 2017

Toward in vivo dosimetry in external beam radiotherapy using x-ray acoustic computed tomography: A soft-tissue phantom study validation

scientific article published on 29 June 2018

Tracking of Mesenchymal Stem Cells with Fluorescence Endomicroscopy Imaging in Radiotherapy-Induced Lung Injury ⬇️

scientific article

Tumor control probability modeling for stereotactic body radiation therapy of early-stage lung cancer using multiple bio-physical models.

scientific article published on 18 November 2016

Unraveling biophysical interactions of radiation pneumonitis in non-small-cell lung cancer via Bayesian network analysis.

scientific article

Variability in clinical target volume delineation for intensity modulated radiation therapy in 3 challenging cervix cancer scenarios

scientific article published on 02 July 2015

Variation in the gross tumor volume and clinical target volume for preoperative radiotherapy of primary large high-grade soft tissue sarcoma of the extremity among RTOG sarcoma radiation oncologists.

scientific article

Volumetric 18 F-FDG-PET parameters as predictors of locoregional failure in low-risk HPV-related oropharyngeal cancer after definitive chemoradiation therapy

scientific article published on 12 December 2018

WE-E-213CD-08: A Novel Level Set Active Contour Algorithm Using the Jensen-Renyi Divergence for Tumor Segmentation in PET.

scientific article published on June 2012

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