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List of works by Joseph E O'Reilly

Bayesian methods outperform parsimony but at the expense of precision in the estimation of phylogeny from discrete morphological data

scientific article

Dating Tips for Divergence-Time Estimation

scientific article published on 12 September 2015

Empirical realism of simulated data is more important than the model used to generate it: a reply to Goloboff et al

scientific article published in 2018

Parsimony and maximum-likelihood phylogenetic analyses of morphology do not generally integrate uncertainty in inferring evolutionary history: a response to Brown et al.

scientific article published in October 2017

Probabilistic methods outperform parsimony in the phylogenetic analysis of data simulated without a probabilistic model

scholarly article by Mark N Puttick et al published 19 August 2018 in Palaeontology

Probabilistic methods surpass parsimony when assessing clade support in phylogenetic analyses of discrete morphological data

scientific article

The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference

scientific article

The impact of fossil stratigraphic ranges on tip‐calibration, and the accuracy and precision of divergence time estimates

scientific article published in 2019

Tips and nodes are complementary not competing approaches to the calibration of molecular clocks

scientific article

Uncertain-tree: discriminating among competing approaches to the phylogenetic analysis of phenotype data

scientific article (publication date: 11 January 2017)