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List of works by John Reid

Branch-recombinant Gaussian processes for analysis of perturbations in biological time series

scholarly article by Christopher A Penfold published in September 2018

Clusternomics: Integrative context-dependent clustering for heterogeneous datasets

scientific article published on 16 October 2017

Conserved Cis-Regulatory Modules Control Robustness in Msx1 Expression at Single-Cell Resolution

scientific article

Evolutionarily conserved regulatory motifs in the promoter of the Arabidopsis clock gene LATE ELONGATED HYPOCOTYL

scientific article published on 29 September 2009

GPseudoRank: a permutation sampler for single cell orderings

scientific article published on 01 February 2019

Integration of multiple epigenomic marks improves prediction of variant impact in saturation mutagenesis reporter assay

scientific article published on 23 June 2019

Metabolic regulation of pluripotency and germ cell fate through α‐ketoglutarate

scientific article

Nodal cis-regulatory elements reveal epiblast and primitive endoderm heterogeneity in the peri-implantation mouse embryo.

scientific article

Nonparametric Bayesian inference of transcriptional branching and recombination identifies regulators of early human germ cell development

article

Pseudotime estimation: deconfounding single cell time series

scientific article published on 17 June 2016

STEME: a robust, accurate motif finder for large data sets.

scientific article

STEME: efficient EM to find motifs in large data sets

scientific article

Transcriptional programs: modelling higher order structure in transcriptional control

scientific article published on 16 July 2009

Variable structure motifs for transcription factor binding sites

scientific article

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