List of works - Jing Qin

Activation of E-prostanoid 3 receptor in macrophages facilitates cardiac healing after myocardial infarction

scientific article published on 03 March 2017

An integrative method to decode regulatory logics in gene transcription

scientific article published on 19 October 2017

BIPES, a cost-effective high-throughput method for assessing microbial diversity.

scientific article

ChIP-Array: combinatory analysis of ChIP-seq/chip and microarray gene expression data to discover direct/indirect targets of a transcription factor

scientific article

CrusTF: a comprehensive resource of transcriptomes for evolutionary and functional studies of crustacean transcription factors

scientific article

DDGni: dynamic delay gene-network inference from high-temporal data using gapped local alignment.

scientific article

Dataset of TWIST1-regulated genes in the cranial mesoderm and a transcriptome comparison of cranial mesoderm and cranial neural crest

scientific article published on 12 September 2016

EpiRegNet: constructing epigenetic regulatory network from high throughput gene expression data for humans

scientific article

Functional networks of aging markers in the glomeruli of IgA nephropathy: a new therapeutic opportunity.

scientific article published on 26 April 2016

Inferring gene regulatory networks by integrating ChIP-seq/chip and transcriptome data via LASSO-type regularization methods.

scientific article

Inhibition of KAP1 enhances hypoxia-induced Kaposi's sarcoma-associated herpesvirus reactivation through RBP-Jκ.

scientific article

NFATc2 enhances tumor-initiating phenotypes through the NFATc2/SOX2/ALDH axis in lung adenocarcinoma

scientific article

Next generation genome sequencing reveals phylogenetic clades with different level of virulence among Salmonella Typhimurium clinical human isolates in Hong Kong

scientific article published on 14 September 2015

PTHGRN: unraveling post-translational hierarchical gene regulatory networks using PPI, ChIP-seq and gene expression data.

scientific article

ProteoMirExpress: inferring microRNA and protein-centered regulatory networks from high-throughput proteomic and mRNA expression data

scientific article

Tacrolimus dose requirement based on the CYP3A5 genotype in renal transplant patients.

scientific article published on 24 May 2017

Transcriptional targets of TWIST1 in the cranial mesoderm regulate cell-matrix interactions and mesenchyme maintenance.

scientific article published on 18 August 2016

Vitamin D inhibits COX-2 expression and inflammatory response by targeting thioesterase superfamily member 4

scientific article (publication date: 25 April 2014)

List of works by Jing Qin

Activation of E-prostanoid 3 receptor in macrophages facilitates cardiac healing after myocardial infarction

An integrative method to decode regulatory logics in gene transcription

BIPES, a cost-effective high-throughput method for assessing microbial diversity.

ChIP-Array: combinatory analysis of ChIP-seq/chip and microarray gene expression data to discover direct/indirect targets of a transcription factor

CrusTF: a comprehensive resource of transcriptomes for evolutionary and functional studies of crustacean transcription factors

DDGni: dynamic delay gene-network inference from high-temporal data using gapped local alignment.

Dataset of TWIST1-regulated genes in the cranial mesoderm and a transcriptome comparison of cranial mesoderm and cranial neural crest

EpiRegNet: constructing epigenetic regulatory network from high throughput gene expression data for humans

Functional networks of aging markers in the glomeruli of IgA nephropathy: a new therapeutic opportunity.

Inferring gene regulatory networks by integrating ChIP-seq/chip and transcriptome data via LASSO-type regularization methods.

Inhibition of KAP1 enhances hypoxia-induced Kaposi's sarcoma-associated herpesvirus reactivation through RBP-Jκ.

NFATc2 enhances tumor-initiating phenotypes through the NFATc2/SOX2/ALDH axis in lung adenocarcinoma

Next generation genome sequencing reveals phylogenetic clades with different level of virulence among Salmonella Typhimurium clinical human isolates in Hong Kong

PTHGRN: unraveling post-translational hierarchical gene regulatory networks using PPI, ChIP-seq and gene expression data.

ProteoMirExpress: inferring microRNA and protein-centered regulatory networks from high-throughput proteomic and mRNA expression data

Tacrolimus dose requirement based on the CYP3A5 genotype in renal transplant patients.

Transcriptional targets of TWIST1 in the cranial mesoderm regulate cell-matrix interactions and mesenchyme maintenance.

Vitamin D inhibits COX-2 expression and inflammatory response by targeting thioesterase superfamily member 4