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List of works by Irene Nobeli

A bioinformatician's view of the metabolome

scientific article (publication date: 2006)

A ligand-centric analysis of the diversity and evolution of protein-ligand relationships in E.coli

scientific article

A structure-based anatomy of the E.coli metabolome

scientific article

A text-mining system for extracting metabolic reactions from full-text articles.

scientific article

Cell-wall synthesis and ribosome maturation are co-regulated by an RNA switch in Mycobacterium tuberculosis.

scientific article published on 29 March 2018

Cmr is a redox-responsive regulator of DosR that contributes to M. tuberculosis virulence

scientific article

Cognate Ligand Domain Mapping for Enzymes

scientific article

Computational modelling of the binding of arachidonic acid to the human monooxygenase CYP2J2.

scientific article published on 28 October 2016

Crystallographic and Cellular Characterisation of Two Mechanisms Stabilising the Native Fold of α1-Antitrypsin: Implications for Disease and Drug Design

scientific article

Dysregulation of Alternative Poly-adenylation as a Potential Player in Autism Spectrum Disorder

scientific article published on 13 September 2017

In praise of slow.

scientific article published in February 2018

In silico assessment of potential druggable pockets on the surface of α1-antitrypsin conformers

scientific article

Interaction of N-methyl-2-alkenyl-4-quinolones with ATP-dependent MurE ligase of Mycobacterium tuberculosis: antibacterial activity, molecular docking and inhibition kinetics

scientific article

KSHV SOX mediated host shutoff: the molecular mechanism underlying mRNA transcript processing

scientific article published on 27 January 2017

Ligand selectivity and competition between enzymes in silico

scientific article

Mapping human metabolic pathways in the small molecule chemical space

scientific article published in October 2009

Molecular docking for substrate identification: the short-chain dehydrogenases/reductases

scientific article

Molecular dynamics simulations of the interaction of wild type and mutant human CYP2J2 with polyunsaturated fatty acids

scientific article published on 21 November 2019

On the molecular discrimination between adenine and guanine by proteins

scientific article published on November 2001

PROCOGNATE: a cognate ligand domain mapping for enzymes

scientific article published on 24 August 2007

Prokaryotic NavMs channel as a structural and functional model for eukaryotic sodium channel antagonism

scientific article

Protein promiscuity and its implications for biotechnology

scientific article published on February 2009

SERAPhiC: a benchmark for in silico fragment-based drug design.

scientific article published on 12 October 2011

Targeting serpins in high-throughput and structure-based drug design

scientific article

Therapeutic target-site variability in α1-antitrypsin characterized at high resolution

scientific article

Untranslated Parts of Genes Interpreted: Making Heads or Tails of High-Throughput Transcriptomic Data via Computational Methods: Computational methods to discover and quantify isoforms with alternative untranslated regions

scientific article

Using structural motif templates to identify proteins with DNA binding function

scientific article published in June 2003

Visualisation of variable binding pockets on protein surfaces by probabilistic analysis of related structure sets.

scientific article

baerhunter: an R package for the discovery and analysis of expressed non-coding regions in bacterial RNA-seq data

scientific article published on 01 February 2020

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