List of works - Christoph Ziegenhain

A systematic evaluation of single cell RNA-seq analysis pipelines

scientific article published on 11 October 2019

Actin stabilizing compounds show specific biological effects due to their binding mode

scientific article published on 05 July 2019

Altered social behavior in mice carrying a cortical Foxp2 deletion

article

Author Correction: Non-canonical Wnt/PCP signalling regulates intestinal stem cell lineage priming towards enteroendocrine and Paneth cell fates

correction of a scholarly article

Azacitidine combined with the selective FLT3 kinase inhibitor crenolanib disrupts stromal protection and inhibits expansion of residual leukemia-initiating cells in FLT3-ITD AML with concurrent epigenetic mutations

scientific article

BAMboozle removes genetic variation from human sequence data for open data sharing

scientific article published on 28 October 2021

Benchmarking single-cell RNA-sequencing protocols for cell atlas projects

scientific article published on 06 April 2020

Characterization of Rare, Dormant, and Therapy-Resistant Cells in Acute Lymphoblastic Leukemia

scientific article published on 18 November 2016

Chivosazole A Modulates Protein-Protein Interactions of Actin

scientific article published on 01 July 2019

Chromatin-remodeling factor SMARCD2 regulates transcriptional networks controlling differentiation of neutrophil granulocytes.

scientific article published on 3 April 2017

Comparative Analysis of Single-Cell RNA Sequencing Methods.

scientific article published on February 2017

Evolutionary routes and KRAS dosage define pancreatic cancer phenotypes

scientific article published on 24 January 2018

GATA2/3-TFAP2A/C transcription factor network couples human pluripotent stem cell differentiation to trophectoderm with repression of pluripotency

scientific article published on 25 October 2017

Low spatial structure and selection against secreted virulence factors attenuates pathogenicity in Pseudomonas aeruginosa

scientific article published on 31 July 2018

Micropatterning as a tool to identify regulatory triggers and kinetics of actin-mediated endothelial mechanosensing

scientific article published on 29 May 2018

Molecular spikes: a gold standard for single-cell RNA counting

scientific article published on 25 April 2022

Niche WNT5A regulates the actin cytoskeleton during regeneration of hematopoietic stem cells

scientific article published on 20 December 2016

Non-canonical Wnt/PCP signalling regulates intestinal stem cell lineage priming towards enteroendocrine and Paneth cell fates

scientific article published on 04 January 2021

Quantitative single-cell transcriptomics

scientific article published on 01 July 2018

Recent evolution of a TET-controlled and DPPA3/STELLA-driven pathway of passive DNA demethylation in mammals

scientific article published on 24 November 2020

Sensitive and powerful single-cell RNA sequencing using mcSCRB-seq

scientific article published in Nature Communications

Single-cell RNA counting at allele and isoform resolution using Smart-seq3

scientific article published on 04 May 2020

TET1 drives global DNA demethylation via DPPA3-mediated inhibition of maintenance methylation

The impact of amplification on differential expression analyses by RNA-seq