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List of works by Rick Farouni

ALTRE: workflow for defining ALTered Regulatory Elements using chromatin accessibility data

scientific article

AmpUMI: Design and analysis of unique molecular identifiers for deep amplicon sequencing

AmpUMI: design and analysis of unique molecular identifiers for deep amplicon sequencing.

scientific article published in July 2018

CRISPR-SURF: discovering regulatory elements by deconvolution of CRISPR tiling screen data

scientific article published on 01 December 2018

Haystack: systematic analysis of the variation of epigenetic states and cell-type specific regulatory elements

scientific article published on 17 January 2018

Model-based analysis of sample index hopping reveals its widespread artifacts in multiplexed single-cell RNA-sequencing

scientific article published on 01 June 2020

Transcriptional reprogramming of skeletal muscle stem cells by the niche environment

scientific article published in 2023

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