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List of works by Sandrine Lagarrigue

A comprehensive analysis of QTL for abdominal fat and breast muscle weights on chicken chromosome 5 using a multivariate approach.

scientific article published on 25 February 2009

A factor model to analyze heterogeneity in gene expression

scientific article

A gene-based radiation hybrid map of chicken microchromosome 14: comparison to human and alignment to the assembled chicken sequence

scientific article published on March 2005

A high-resolution radiation hybrid map of chicken chromosome 5 and comparison with human chromosomes

scientific article

A minimal model for hepatic fatty acid balance during fasting: application to PPAR alpha-deficient mice.

scientific article published on 25 July 2009

A transcriptome multi-tissue analysis identifies biological pathways and genes associated with variations in feed efficiency of growing pigs

scientific article

Altered response to growth factors in rat epithelial liver cells overexpressing human c-Fos protein.

scientific article published on December 1992

Analysis of allele-specific expression in mouse liver by RNA-Seq: a comparison with Cis-eQTL identified using genetic linkage

scientific article published on 11 September 2013

AnnotQTL: a new tool to gather functional and comparative information on a genomic region

scientific article published on 19 May 2011

Chicken adaptive response to low energy diet: main role of the hypothalamic lipid metabolism revealed by a phenotypic and multi-tissue transcriptomic approach

scientific article published on 30 December 2019

Cloning and characterization of HEP21, a new member of the uPAR/Ly6 protein superfamily predominantly expressed in hen egg white.

scientific article published on February 2003

Cloning and mapping of the ACLY gene to a chicken microchromosome

article

Cloning of cDNA encoding the nuclear form of chicken sterol response element binding protein-2 (SREBP-2), chromosomal localization, and tissue expression of chicken SREBP-1 and -2 genes.

scientific article

Combined QTL and selective sweep mappings with coding SNP annotation and cis-eQTL analysis revealed PARK2 and JAG2 as new candidate genes for adiposity regulation

scientific article

Comparison of whole-genome (13X) and capture (87X) resequencing methods for SNP and genotype callings

scientific article published on 16 December 2014

Complex trait subtypes identification using transcriptome profiling reveals an interaction between two QTL affecting adiposity in chicken

scientific article

Detection of a Cis [corrected] eQTL controlling BCMO1 gene expression leads to the identification of a QTG for chicken breast meat color

scientific article

Development of 112 unique expressed sequence tags from chicken liver using an arbitrarily primed reverse transcriptase-polymerase chain reaction and single strand conformation gel purification method

scientific article

Dietary energy sources affect the partition of body lipids and the hierarchy of energy metabolic pathways in growing pigs differing in feed efficiency1,2

scientific article published on 24 September 2014

Expanding Duplication of Free Fatty Acid Receptor-2 (GPR43) Genes in the Chicken Genome

scientific article published on 24 April 2015

Fatness QTL on chicken chromosome 5 and interaction with sex.

scientific article published on 26 April 2006

Genetic linkage and expression analysis of SREBP and lipogenic genes in fat and lean chicken

scientific article

Genome-Wide Characterization of RNA Editing in Chicken Embryos Reveals Common Features among Vertebrates

scientific article published on 29 May 2015

Genome-wide interval mapping using SNPs identifies new QTL for growth, body composition and several physiological variables in an F2 intercross between fat and lean chicken lines

scientific article published on 30 September 2013

Hepatic circadian clock oscillators and nuclear receptors integrate microbiome-derived signals

scientific article published on 16 February 2016

Hepatic lipogenesis gene expression in two experimental egg-laying lines divergently selected on residual food consumption

scientific article published on March 2000

Limited RNA editing in exons of mouse liver and adipose

scientific article published on 14 February 2013

Liver PPARα is crucial for whole-body fatty acid homeostasis and is protective against NAFLD.

scientific article published on February 2016

Liver X receptor alpha regulates fatty acid synthase expression in chicken

scientific article

Long noncoding RNA repertoire in chicken liver and adipose tissue

scientific article published on 10 January 2017

Long noncoding RNAs in lipid metabolism: literature review and conservation analysis across species

scientific article published on 21 November 2019

Mapping of the ME1 locus to chicken chromosome 3.

scientific article published in December 1998

Mapping quantitative trait loci affecting fatness and breast muscle weight in meat-type chicken lines divergently selected on abdominal fatness

scientific article published on January 2006

Methods for interpreting lists of affected genes obtained in a DNA microarray experiment

scientific article (2009)

Microarray analysis of differential gene expression in the liver of lean and fat chickens

scientific article published on 02 March 2006

Molecular alterations induced by a high-fat high-fiber diet in porcine adipose tissues: variations according to the anatomical fat location

scientific article published on 18 February 2016

Muscle transcriptome analysis reveals molecular pathways and biomarkers involved in extreme ultimate pH and meat defect occurrence in chicken.

scientific article published on 25 July 2017

Pathway results from the chicken data set using GOTM, Pathway Studio and Ingenuity softwares

scientific article published on 16 July 2009

Pertinent plasma indicators of the ability of chickens to synthesize and store lipids1

scientific article published on 01 January 2015

Pleiotropic effects of polymorphism of the gene diacylglycerol-O-transferase 1 (DGAT1) in the mammary gland tissue of dairy cows.

scientific article published in September 2012

Qualitative analysis of the relation between DNA microarray data and behavioral models of regulation networks.

scientific article

RNA-Seq Data for Reliable SNP Detection and Genotype Calling: Interest for Coding Variant Characterization and <i>Cis</i>-Regulation Analysis by Allele-Specific Expression in Livestock Species

scientific article published on 28 June 2021

Re-sequencing data for refining candidate genes and polymorphisms in QTL regions affecting adiposity in chicken

scientific article

Regulation of LPCAT3 by LXR

scientific article

Role of hepatic lipogenesis in the susceptibility to fatty liver in the goose (Anser anser)

scientific article published on 01 May 2000

The Extent of mRNA Editing Is Limited in Chicken Liver and Adipose, but Impacted by Tissular Context, Genotype, Age, and Feeding as Exemplified with a Conserved Edited Site in COG3.

scientific article published on 4 December 2015

The Transformation of C-Jun-Overexpressing Cells Is Correlated with IGFS-Induced C-Jun Phosphorylation

scientific article published on 01 December 1995

The ability of genetically lean or fat slow-growing chickens to synthesize and store lipids is not altered by the dietary energy source

scientific article published on 11 May 2015

The loss of adipokine genes in the chicken genome and implications for insulin metabolism

scientific article

Thermal manipulation of the chicken embryo triggers differential gene expression in response to a later heat challenge

scientific article

Third Report on Chicken Genes and Chromosomes 2015.

scientific article published on 14 July 2015

Topology and static response of interaction networks in molecular biology

scientific article

Transcriptome profiling of the feeding-to-fasting transition in chicken liver

scientific article

Transcriptome-wide investigation of genomic imprinting in chicken

scientific article published on 21 January 2014

Transcriptomes of whole blood and PBMC in chickens.

scientific article

Using a large-scale knowledge database on reactions and regulations to propose key upstream regulators of various sets of molecules participating in cell metabolism

scientific article

Using transcriptome profiling to characterize QTL regions on chicken chromosome 5.

scientific article

sigReannot: an oligo-set re-annotation pipeline based on similarities with the Ensembl transcripts and Unigene clusters

scientific article

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