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List of works by David W Cleary

16S sequencing and functional analysis of the fecal microbiome during treatment of newly diagnosed pediatric inflammatory bowel disease.

scientific article

Acinetobacter spp. Infections in Malaysia: A Review of Antimicrobial Resistance Trends, Mechanisms and Epidemiology

scientific article published on 12 December 2017

An inducible transposon mutagenesis approach for the intracellular human pathogen <i>Chlamydia trachomatis</i>

scientific article published on 16 November 2021

Analysis and Interpretation of the Human Microbiome

scientific article

Comparative Genomics of Carriage and Disease Isolates of Streptococcus pneumoniae Serotype 22F Reveals Lineage-Specific Divergence and Niche Adaptation

scientific article published on 24 March 2016

Correction to: Neisseria lactamica Y92-1009 complete genome sequence.

scientific article published on 16 February 2018

Dual RNASeq Reveals NTHi-Macrophage Transcriptomic Changes During Intracellular Persistence

scientific article published on 23 August 2021

Informing pneumococcal conjugate vaccine policy in middle-income countries: The case of Malaysia.

scientific article published on 24 March 2017

Microbial epidemiology and carriage studies for the evaluation of vaccines

scientific article published on 01 October 2019

Microevolution of Neisseria lactamica during nasopharyngeal colonisation induced by controlled human infection

scientific article published in Nature Communications

Neisseria lactamica Y92-1009 complete genome sequence.

scientific article

Patients with Chronic Obstructive Pulmonary Disease harbour a variation of Haemophilus species

scientific article published in Scientific Reports

Pneumococcal conjugate vaccine implementation in middle-income countries

scientific article

Pneumococcal vaccine impacts on the population genomics of non-typeable Haemophilus influenzae

scientific article published on 06 August 2018

Pre-vaccine serotype composition within a lineage signposts its serotype replacement - a carriage study over 7 years following pneumococcal conjugate vaccine use in the UK.

scientific article published on 9 June 2017

Prevalence and antimicrobial susceptibilities of Acinetobacter baumannii and non-baumannii Acinetobacters from Terengganu, Malaysia and their carriage of carbapenemase genes

scientific article published on 25 September 2018

Secondary Bacterial Infections Associated with Influenza Pandemics

scientific article

Serotype distribution of disease-causing Streptococcus pneumoniae in Thailand: A systematic review

scientific article published on 03 May 2019

Strain discrimination of Yersinia pestis using a SERS-based electrochemically driven melting curve analysis of variable number tandem repeat sequences

scientific article published on 7 January 2015

The adhesins of non-typeable Haemophilus influenzae.

scientific article published on 8 February 2018

The hospital microbiome project: meeting report for the UK science and innovation network UK-USA workshop ‘beating the superbugs: hospital microbiome studies for tackling antimicrobial resistance’, October 14th 2013

article

The rise and fall of pneumococcal serotypes carried in the PCV era.

scientific article

The upper respiratory tract microbiome of indigenous Orang Asli in north-eastern Peninsular Malaysia

scientific article published on 05 January 2021

Using surface-enhanced Raman spectroscopy and electrochemically driven melting to discriminate Yersinia pestis from Y. pseudotuberculosis based on single nucleotide polymorphisms within unpurified polymerase chain reaction amplicons

scientific article published on 15 January 2015

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