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List of works by Petr Novák

1.2 Å resolution crystal structure of Escherichia coli WrbA holoprotein

scientific article

A new type of membrane raft-like microdomains and their possible involvement in TCR signaling.

scientific article

A proteolytically truncated form of free CD18, the common chain of leukocyte integrins, as a novel marker of activated myeloid cells.

scientific article published in September 2001

Abnormal expression and processing of uromodulin in Fabry disease reflects tubular cell storage alteration and is reversible by enzyme replacement therapy.

scientific article published on 27 July 2008

Addressing the Molecular Mechanism of Longitudinal Lamin Assembly Using Chimeric Fusions

scientific article published on 07 July 2020

Application of silicon nanowires and indium tin oxide surfaces in desorption electrospray ionization.

scientific article

Automated ambient desorption-ionization platform for surface imaging integrated with a commercial Fourier transform ion cyclotron resonance mass spectrometer.

scientific article

Binding of eIF3 in complex with eIF5 and eIF1 to the 40S ribosomal subunit is accompanied by dramatic structural changes

scientific article published on 01 September 2019

Biologically active metabolites produced by the basidiomycete Quambalaria cyanescens

scientific article

Carbohydrate synthesis and biosynthesis technologies for cracking of the glycan code: recent advances.

scientific article published on 28 March 2012

Characterization of DESI-FTICR mass spectrometry - from ECD to accurate mass tissue analysis

scientific article published in February 2008

Characterization of Pseudacyclins A−E, a Suite of Cyclic Peptides Produced byPseudallescheria boydii

scientific article published on 28 May 2010

Chemical Cross-Linking and H/D Exchange for Fast Refinement of Protein Crystal Structure

scientific article published on 23 December 2011

Cytotoxic Lipopeptide Muscotoxin A, Isolated from Soil Cyanobacterium Desmonostoc muscorum, Permeabilizes Phospholipid Membranes by Reducing Their Fluidity

scientific article published on 26 January 2015

Effective removal of nonionic detergents in protein mass spectrometry, hydrogen/deuterium exchange, and proteomics.

scientific article published in June 2010

Ergochromes: Heretofore Neglected Side of Ergot Toxicity

scientific article published on 25 July 2019

Expression and purification of soluble and stable ectodomain of natural killer cell receptor LLT1 through high-density transfection of suspension adapted HEK293S GnTI(-) cells.

scientific article

First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study

scientific article published on 22 May 2019

Heat shock protein 90 recognized as an iron-binding protein associated with the plasma membrane of HeLa cells.

scientific article published in January 2004

Heterobifunctional photoaffinity probes for cytochrome P450 2B.

scientific article

High-level expression of soluble form of mouse natural killer cell receptor NKR-P1C(B6) in Escherichia coli.

scientific article published in February 2011

High-throughput workflow for identification of phosphorylated peptides by LC-MALDI-TOF/TOF-MS coupled to in situ enrichment on MALDI plates functionalized by ion landing.

scientific article published on June 2015

Human leukocytes contain a large pool of free forms of CD18.

scientific article

Hydnocarpin-Type Flavonolignans: Semisynthesis and Inhibitory Effects on Staphylococcus aureus Biofilm Formation

scientific article published on 14 August 2015

Hydroxylated anthraquinones produced by Geosmithia species.

scientific article published on 2 August 2009

Impact of Chemical Cross-Linking on Protein Structure and Function.

scientific article published on 12 December 2017

In-situ enrichment of phosphopeptides on MALDI plates modified by ambient ion landing.

scientific article

Increased expression of secretory actin-binding protein on human spermatozoa is associated with poor semen quality.

scientific article

Influence of cross-linker polarity on selectivity towards lysine side chains

scientific article published on 20 February 2020

Interaction of Bordetella adenylate cyclase toxin with complement receptor 3 involves multivalent glycan binding

scientific article published on 29 December 2014

LC MALDI-TOF MS/MS and LC ESI FTMS analyses of HLA-B27 associated peptides isolated from peripheral blood cells.

scientific article

Large Propeptides of Fungal β-N-Acetylhexosaminidases Are Novel Enzyme Regulators That Must Be Intracellularly Processed to Control Activity, Dimerization, and Secretion into the Extracellular Environment†

scientific article published on 16 February 2007

Laser desorption-ionization of lipid transfers: tissue mass spectrometry imaging without MALDI matrix

scientific article published on 01 June 2010

LinX: A Software Tool for Uncommon Cross-Linking Chemistry

scientific article published on 04 March 2021

Lincomycin biosynthesis involves a tyrosine hydroxylating heme protein of an unusual enzyme family

scientific article

Lincosamide synthetase--a unique condensation system combining elements of nonribosomal peptide synthetase and mycothiol metabolism

scientific article published on 5 March 2015

MS-Based Approaches Enable the Structural Characterization of Transcription Factor/DNA Response Element Complex

scientific article published on 26 September 2019

Mapping protein structural changes by quantitative cross-linking.

scientific article

Modified electrophoretic and digestion conditions allow a simplified mass spectrometric evaluation of disulfide bonds.

scientific article

Molecular architecture of mouse activating NKR-P1 receptors

scientific article

Mouse Clr-g, a ligand for NK cell activation receptor NKR-P1F: crystal structure and biophysical properties

scientific article

New insight into the role of a base in the mechanism of imine transfer hydrogenation on a Ru(II) half-sandwich complex

scientific article published on 01 April 2013

New polyene macrolide family produced by submerged culture of Streptomyces durmitorensis. ⬇️

scientific article published on 14 September 2011

Nkrp1 family, from lectins to protein interacting molecules.

scientific article published on 17 February 2015

Non-T cell activation linker (NTAL): a transmembrane adaptor protein involved in immunoreceptor signaling

scientific article

Novel Aeruginosin-865 from Nostoc sp. as a potent anti-inflammatory agent

scientific article

Nuclear DNA helicase II is recruited to IFN-alpha-activated transcription sites at PML nuclear bodies.

scientific article published on 5 August 2002

Oligomeric Architecture of Mouse Activating Nkrp1 Receptors on Living Cells

scientific article published on 16 April 2019

PSTPIP2, a Protein Associated with Autoinflammatory Disease, Interacts with Inhibitory Enzymes SHIP1 and Csk.

scientific article published on 24 August 2015

Paxillin-dependent regulation of IGF2 and H19 gene cluster expression

scientific article published on 26 June 2015

Pharmacological inhibition of fatty-acid oxidation synergistically enhances the effect of l-asparaginase in childhood ALL cells.

scientific article published on 4 August 2015

Planar Functionalized Surfaces for Direct Immunoaffinity Desorption/Ionization Mass Spectrometry

scientific article published on 19 October 2015

Poly[N-(2-hydroxypropyl)methacrylamide]-Based Tissue-Embedding Medium Compatible with MALDI Mass Spectrometry Imaging Experiments ⬇️

scientific article published on June 14, 2011

Preparation of soluble isotopically labeled NKp30, a human natural cytotoxicity receptor, for structural studies using NMR

scientific article published on 08 October 2012

Production of (+)-globulol needle crystals on the surface mycelium of Quambalaria cyanescens.

scientific article published on 15 May 2008

Proteomic analysis uncovers a metabolic phenotype in C. elegans after nhr-40 reduction of function

scientific article

Re-evaluation of the involvement of NK cells and C-type lectin-like NK receptors in modulation of immune responses by multivalent GlcNAc-terminated oligosaccharides

scientific article published on 25 September 2013

Relapsed acute lymphoblastic leukemia-specific mutations in NT5C2 cluster into hotspots driving intersubunit stimulation.

scientific article

Role of the EF-hand-like motif in the 14-3-3 protein-mediated activation of yeast neutral trehalase Nth1.

scientific article

SKIP and BIR-1/Survivin have potential to integrate proteome status with gene expression

scientific article published in August 2014

Single-step affinity purification of recombinant proteins using a self-excising module from Neisseria meningitidis FrpC.

scientific article published on 28 July 2008

Specific nuclear localizing sequence directs two myosin isoforms to the cell nucleus in calmodulin-sensitive manner.

scientific article

Strategy for selective chemical cross-linking of tyrosine and lysine residues.

scientific article published on November 2004

Structural basis of the 14-3-3 protein-dependent activation of yeast neutral trehalase Nth1.

scientific article published on 29 May 2013

Structural model of lymphocyte receptor NKR-P1C revealed by mass spectrometry and molecular modeling

article

Structure analysis of trivalent glycoclusters by post-source decay matrix-assisted laser desorption/ionization mass spectrometry ⬇️

scientific article published on July 1, 1998

Structure and dynamics of dark-state bovine rhodopsin revealed by chemical cross-linking and high-resolution mass spectrometry.

scientific article

Structure of the dimeric N-glycosylated form of fungal beta-N-acetylhexosaminidase revealed by computer modeling, vibrational spectroscopy, and biochemical studies.

scientific article

Synthesis of chitooligomer-based glycoconjugates and their binding to the rat natural killer cell activation receptor NKR-P1.

scientific article published in October 2001

Systemic AL amyloidosis with unusual cutaneous presentation unmasked by carotenoderma

scientific article published on 15 November 2013

Target antigens for Hs-14 monoclonal antibody and their various expression in normozoospermic and asthenozoospermic men.

scientific article

Targeting ERK-Hippo Interplay in Cancer Therapy

scientific article published on 03 May 2020

The MEK-ERK-MST1 Axis Potentiates the Activation of the Extrinsic Apoptotic Pathway during GDC-0941 Treatment in Jurkat T Cells

scientific article published on 21 February 2019

The application of an emerging technique for protein-protein interaction interface mapping: the combination of photo-initiated cross-linking protein nanoprobes with mass spectrometry.

scientific article

Unambiguous assignment of intramolecular chemical cross-links in modified mammalian membrane proteins by Fourier transform-tandem mass spectrometry.

scientific article published in August 2005

Utilization of high-accuracy FTICR-MS data in protein quantitation experiments

scientific article published in November 2009

mMass 3: a cross-platform software environment for precise analysis of mass spectrometric data.

scientific article

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