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List of works by Claudia Marcia Aparecida Carareto

A machine learning based framework to identify and classify long terminal repeat retrotransposons. ⬇️

scientific article published on 23 April 2018

A single P115Q mutation modulates specificity in the Corynebacterium pseudotuberculosis arginine repressor

scientific article published on 07 March 2020

Analysis of HCV quasispecies dynamic under selective pressure of combined therapy.

scientific article

Ancestral polymorphism and recent invasion of transposable elements in Drosophila species ⬇️

scientific article

Canonical P elements are transcriptionally active in the saltans group of Drosophila.

scientific article published in July 2004

Characterization of hobo element copy number and integrity in Brasilian populations of Drosophila melanogaster

scientific article published in January 2003

Copia retrotransposon in the Zaprionus genus: another case of transposable element sharing with the Drosophila melanogaster subgroup.

scientific article published on 24 February 2011

Copy number of P elements, KP/full-sized P element ratio and their relationships with environmental factors in Brazilian Drosophila melanogaster populations.

scientific article published on December 2003

Diversity and adaptation of human respiratory syncytial virus genotypes circulating in two distinct communities: public hospital and day care center

scientific article

Drosophila melanogaster P transposable elements: mechanisms of transposition and regulation

scientific article published in June 2004

Effects of genetic polymorphisms CYP1A1, GSTM1, GSTT1 and GSTP1 on urinary 1-hydroxypyrene levels in sugarcane workers

scientific article published on 17 August 2006

Estimating genomic instability mediated by Alu retroelements in breast cancer ⬇️

scientific article

FISH using a gag-like fragment probe reveals a common Ty3-gypsy-like retrotransposon in genome of Coffea species

scientific article published on 23 November 2012

Genetic diversity of NS5A protein from hepatitis C virus genotype 3a and its relationship to therapy response

scientific article

Genome of Rhodnius prolixus, an insect vector of Chagas disease, reveals unique adaptations to hematophagy and parasite infection

scientific article

Genome-wide analysis of transposable elements in the coffee berry borer Hypothenemus hampei (Coleoptera: Curculionidae): description of novel families.

scientific article

Genomic regions harboring insecticide resistance-associated Cyp genes are enriched by transposable element fragments carrying putative transcription factor binding sites in two sibling Drosophila species.

scientific article published on 19 December 2013

Gonadal hybrid dysgenesis in Drosophila sturtevanti (Diptera, Drosophilidae)

scientific article published in 2002

Helena and BS: Two Travellers between the Genera Drosophila and Zaprionus

scientific article published in 2018

High frequency of horizontal transfer in Jockey families (LINE order) of drosophilids

scientific article published on 04 November 2019

Homology-Free Detection of Transposable Elements Unveils Their Dynamics in Three Ecologically Distinct Rhodnius Species

scientific article published on 06 February 2020

Identification of misexpressed genetic elements in hybrids between Drosophila-related species

scientific article (publication date: 16 January 2017)

Identification of two subfamilies of micropia transposable element in species of the repleta group of Drosophila.

scientific article published in June 2004

Insights into the evolutionary dynamics of Neotropical biomes from the phylogeography and paleodistribution modeling of Bromelia balansae

scientific article published on 15 October 2018

Is the evolutionary history of the O-type P element in the saltans and willistoni groups of Drosophila similar to that of the canonical P element?

scientific article published on 22 November 2007

Large distribution and high sequence identity of a Copia-type retrotransposon in angiosperm families

scientific article published on 6 August 2015

Learning HMMs for nucleotide sequences from amino acid alignments.

scientific article published on 31 January 2015

Losing identity: structural diversity of transposable elements belonging to different classes in the genome of Anopheles gambiae ⬇️

scientific article (publication date: 22 June 2012)

Multiple events of horizontal transfer of the Minos transposable element between Drosophila species.

scientific article published in February 2005

Multiple invasions of Gypsy and Micropia retroelements in genus Zaprionus and melanogaster subgroup of the genus Drosophila ⬇️

scientific article

On hepatitis C virus evolution: the interaction between virus and host towards treatment outcome.

scientific article

P elements in the saltans group of Drosophila: a new evaluation of their distribution and number of genomic insertion sites.

scientific article published in July 2004

Plasmodium vivax circumsporozoite genotypes: a limited variation or new subspecies with major biological consequences?

scientific article published on 23 June 2010

Revisiting horizontal transfer of transposable elements in Drosophila

scientific article published on 23 April 2008

SNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence

scientific article

Scenario of the spread of the invasive species Zaprionus indianus Gupta, 1970 (Diptera, Drosophilidae) in Brazil. ⬇️

scientific article published on October 2010

Sequence heterogeneity and phylogenetic relationships between the copia retrotransposon in Drosophila species of the repleta and melanogaster groups

scientific article published on 06 September 2006

Short interspersed CAN SINE elements as prognostic markers in canine mammary neoplasia

scientific article published on 31 October 2013

Specific activation of an I-like element in Drosophila interspecific hybrids.

scientific article

Taxonomic and evolutionary analysis of Zaprionus indianus and its colonization of Palearctic and Neotropical regions.

scientific article

Testing transposable elements as genetic drive mechanisms using Drosophila P element constructs as a model system

scientific article published on January 1, 1997

The contribution of transposable elements to Bos taurus gene structure.

scientific article published on 28 October 2006

The copia retrotransposon and horizontal transfer in Drosophila willistoni.

scientific article published on 31 March 2011

The distribution of the P-M hybrid dysgenesis system in Drosophila melanogaster strains from Brazil

scientific article published on 01 January 1999

The evolutionary dynamics of the Helena retrotransposon revealed by sequenced Drosophila genomes

scientific article published on 22 July 2009

The protist Trichomonas vaginalis harbors multiple lineages of transcriptionally active Mutator-like elements

scientific article

Transcriptional activity, chromosomal distribution and expression effects of transposable elements in Coffea genomes

scientific article

Transposable elements in Coffea (Gentianales: Rubiacea) transcripts and their role in the origin of protein diversity in flowering plants

scientific article published on 30 January 2008

Transposable elements in the Anopheles funestus transcriptome.

scientific article published on 19 April 2017

Transposition burst of mariner-like elements in the sequenced genome of Rhodnius prolixus.

scientific article published on 9 September 2015

Transposon display supports transpositional activity of P elements in species of the saltans group of Drosophila.

scientific article published in April 2007

Vertical inheritance and bursts of transposition have shaped the evolution of the BS non-LTR retrotransposon in Drosophila.

scientific article published on 27 May 2011

kDNA gene signatures of Trypanosoma cruzi in blood and oesophageal mucosa from chronic chagasic patients

scientific article published on 9 July 2008

msechBari, a new MITE-like element inDrosophila sechelliarelated to theBaritransposon ⬇️

scientific article published on December 1, 2011

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